trueprice / python-graph-clustering
A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from protein-protein interaction networks.
☆94Updated 6 years ago
Alternatives and similar repositories for python-graph-clustering:
Users that are interested in python-graph-clustering are comparing it to the libraries listed below
- An implementation of "EdMot: An Edge Enhancement Approach for Motif-aware Community Detection" (KDD 2019)☆132Updated 2 years ago
- Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".☆174Updated last year
- An implementation of "Community Preserving Network Embedding" (AAAI 2017)☆121Updated 2 years ago
- embedding attributed graphs☆58Updated 3 years ago
- A SciPy implementation of "GraRep: Learning Graph Representations with Global Structural Information" (WWW 2015).☆64Updated 2 years ago
- A NetworkX implementation of "Ego-splitting Framework: from Non-Overlapping to Overlapping Clusters" (KDD 2017).☆84Updated 2 years ago
- node2vec implementation in C++☆53Updated 4 years ago
- ☆28Updated 7 years ago
- ☆172Updated 6 years ago
- A curated list of network embedding techniques.☆34Updated 4 years ago
- An alternative implementation of Recursive Feature and Role Extraction (KDD11 & KDD12)☆70Updated 2 years ago
- A NetworkX implementation of Label Propagation from a "Near Linear Time Algorithm to Detect Community Structures in Large-Scale Networks"…☆124Updated 2 years ago
- Keras implementation of Structural Deep Network Embedding, KDD 2016☆92Updated 6 years ago
- This repository provides a reference implementation of struc2vec.☆388Updated last year
- OhmNet: Representation learning in multi-layer graphs☆82Updated 4 years ago
- Reference implementation of the paper VERSE: Versatile Graph Embeddings from Similarity Measures☆130Updated 4 years ago
- Reference implementation of Diffusion2Vec (Complenet 2018) built on Gensim and NetworkX.☆126Updated 2 years ago
- Graph Embedding via Frequent Subgraphs☆44Updated 4 years ago
- LEMON: A local algorithm for fast, high-precision overlapping community detection☆54Updated 7 years ago
- A novel approach to evaluate community detection algorithms on ground truth☆22Updated 3 years ago
- A package for computing Graph Kernels☆104Updated last year
- A lightweight implementation of Walklets from "Don't Walk Skip! Online Learning of Multi-scale Network Embeddings" (ASONAM 2017).☆105Updated 2 years ago
- Implements the bigCLAM algorithm☆51Updated 5 years ago
- ☆39Updated 9 years ago
- A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a co…☆70Updated 2 years ago
- [DSAA 2018] Autoencoders for Link Prediction and Semi-Supervised Node Classification☆255Updated 5 years ago
- A sparsity aware and memory efficient implementation of "Attributed Social Network Embedding" (TKDE 2018).☆82Updated 2 years ago
- Market Survey: Community Detection☆70Updated 7 years ago
- The implementation that infers the temporal latent spaces for a sequence of dynamic graph snapshots☆64Updated 7 years ago
- Benchmark for Graph Embedding Methods☆47Updated 4 years ago