trueprice / python-graph-clustering
A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from protein-protein interaction networks.
☆94Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for python-graph-clustering
- Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".☆174Updated last year
- node2vec implementation in C++☆51Updated 4 years ago
- ☆170Updated 5 years ago
- OhmNet: Representation learning in multi-layer graphs☆79Updated 4 years ago
- An implementation of "Community Preserving Network Embedding" (AAAI 2017)☆120Updated 2 years ago
- An implementation of "EdMot: An Edge Enhancement Approach for Motif-aware Community Detection" (KDD 2019)☆133Updated 2 years ago
- Keras implementation of Structural Deep Network Embedding, KDD 2016☆92Updated 6 years ago
- embedding attributed graphs☆58Updated 2 years ago
- SNAP Python code, SWIG related files☆298Updated 2 years ago
- The TensorFlow reference implementation of 'GEMSEC: Graph Embedding with Self Clustering' (ASONAM 2019).☆253Updated 2 years ago
- Source Code of GraRep☆53Updated 6 years ago
- Learning node representation using edge semantics☆52Updated 5 years ago
- Network Embedding as Matrix Factorization: Unifying DeepWalk, LINE, PTE, and node2vec☆186Updated 4 years ago
- Reference implementation of the paper VERSE: Versatile Graph Embeddings from Similarity Measures☆128Updated 3 years ago
- The implementation that infers the temporal latent spaces for a sequence of dynamic graph snapshots☆65Updated 7 years ago
- Autoencoders for Link Prediction and Semi-Supervised Node Classification (DSAA 2018)☆253Updated 5 years ago
- ☆136Updated 3 years ago
- Graph similarity algorithms based on NetworkX.☆166Updated 5 years ago
- Contains the code (and working vm setup) for our KDD MLG 2016 paper titled: "subgraph2vec: Learning Distributed Representations of Rooted…☆42Updated 7 years ago
- Implementation of the Louvain algorithm for community detection with various methods for use with igraph in python.☆246Updated 2 months ago
- ☆28Updated 6 years ago
- A Parallel Graphlet Decomposition Library for Large Graphs☆87Updated 5 years ago
- Graph Embedding via Frequent Subgraphs☆44Updated 4 years ago
- Some add-on modules to networkx library☆79Updated 4 years ago
- Reference implementation of Diffusion2Vec (Complenet 2018) built on Gensim and NetworkX.☆126Updated 2 years ago
- Market Survey: Community Detection☆71Updated 7 years ago
- Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bi…☆225Updated 4 years ago
- Implementation of ComE algorithm☆59Updated 2 years ago
- An alternative implementation of Recursive Feature and Role Extraction (KDD11 & KDD12)☆67Updated 2 years ago
- A novel approach to evaluate community detection algorithms on ground truth☆21Updated 3 years ago