trueprice / python-graph-clusteringLinks
A collection of Python scripts that implement various graph clustering algorithms, specifically for identifying protein complexes from protein-protein interaction networks.
☆94Updated 7 years ago
Alternatives and similar repositories for python-graph-clustering
Users that are interested in python-graph-clustering are comparing it to the libraries listed below
Sorting:
- ☆173Updated 7 years ago
- SNAP Python code, SWIG related files☆306Updated 3 years ago
- Reference implementation of the paper VERSE: Versatile Graph Embeddings from Similarity Measures☆133Updated 4 years ago
- OhmNet: Representation learning in multi-layer graphs☆84Updated 5 years ago
- markov clustering in python☆175Updated 4 years ago
- Graph similarity algorithms based on NetworkX.☆170Updated 6 years ago
- An implementation of "EdMot: An Edge Enhancement Approach for Motif-aware Community Detection" (KDD 2019)☆133Updated 3 years ago
- An implementation of "Community Preserving Network Embedding" (AAAI 2017)☆120Updated 3 years ago
- node2vec implementation in C++☆53Updated 5 years ago
- Implementation of the Louvain algorithm for community detection with various methods for use with igraph in python.☆254Updated last year
- A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a co…☆74Updated 3 years ago
- Programs to identify link communities in complex networks☆98Updated 4 years ago
- Source code for EvalNE, a Python library for evaluating Network Embedding methods.☆107Updated last week
- A sparsity aware implementation of "Deep Autoencoder-like Nonnegative Matrix Factorization for Community Detection" (CIKM 2018).☆207Updated 2 years ago
- ☆144Updated 4 years ago
- Algorithms for local community detection in networks☆26Updated 9 years ago
- pure python code for rank aggregation/voting☆31Updated 4 years ago
- [DSAA 2018] Autoencoders for Link Prediction and Semi-Supervised Node Classification☆254Updated 6 years ago
- Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".☆178Updated 2 years ago
- A python package for graph kernels, graph edit distances, and graph pre-image problem.☆128Updated 6 months ago
- The TensorFlow reference implementation of 'GEMSEC: Graph Embedding with Self Clustering' (ASONAM 2019).☆258Updated 3 years ago
- Python implementation of Kohler et al.'s random walk with restart☆29Updated 7 years ago
- A package for computing Graph Kernels☆104Updated 2 years ago
- Benchmark for Graph Embedding Methods☆48Updated 5 years ago
- This repository provides a reference implementation of struc2vec.☆395Updated 2 years ago
- NetLSD descriptors for graphs. Compare and analyze graph structure on multiple levels!☆61Updated 5 years ago
- A scalable implementation of "Learning Structural Node Embeddings Via Diffusion Wavelets (KDD 2018)".☆189Updated 2 years ago
- ☆51Updated 9 years ago
- Reference implementation of Diffusion2Vec (Complenet 2018) built on Gensim and NetworkX.☆127Updated 3 years ago
- A novel approach to evaluate community detection algorithms on ground truth☆22Updated 4 years ago