☆13Dec 29, 2021Updated 4 years ago
Alternatives and similar repositories for DeSIDE-DDI
Users that are interested in DeSIDE-DDI are comparing it to the libraries listed below
Sorting:
- Software tool for metabolic modelling in Systems Biology☆10Dec 30, 2020Updated 5 years ago
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 3 years ago
- ☆20Aug 28, 2022Updated 3 years ago
- L1000 peak deconvolution based on Bayesian analysis☆28Oct 10, 2021Updated 4 years ago
- Machine Learning with Python☆12Jul 25, 2022Updated 3 years ago
- A comprehensive command-line based pipeline for the analysis of direct injection FT-ICR mass spectrometry data☆12Feb 18, 2026Updated 2 weeks ago
- Addressing the problem of predicting crime occurrence based on historic records☆11Nov 27, 2019Updated 6 years ago
- JSON-based FON (Feature Object Notation) format and tools to simplify genomic annotations usage☆13Jun 11, 2025Updated 8 months ago
- A tool that lauches docker jobs on Amazon EC2.☆10May 7, 2019Updated 6 years ago
- ☆13Jun 18, 2025Updated 8 months ago
- ☆37Jun 6, 2022Updated 3 years ago
- Implementation of Shape and Electrostatic similarity metric in deepFMPO.☆45Jan 27, 2022Updated 4 years ago
- IPython notebooks for "Computer Simulations of Sensory Systems"☆10Nov 15, 2024Updated last year
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated 11 months ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- ☆11Jan 7, 2025Updated last year
- Code for ICML21 paper "Learning Self-Modulating Attention in Continuous Time Space with Applications to Sequential Recommendation"☆12Feb 8, 2023Updated 3 years ago
- Mitigating the Filter Bubble while Maintaining Relevance: Targeted Diversification with VAE-based Recommender Systems☆10Mar 15, 2023Updated 2 years ago
- Graphical intuition to MOSFET square-law☆11Jan 5, 2021Updated 5 years ago
- This is the code of paper: Robust Mid-Pass Filtering Graph Convolutional Networks.(paper accepted by WWW2023)☆13Feb 17, 2023Updated 3 years ago
- ☆11Jul 20, 2021Updated 4 years ago
- The official PyTorch implementation of "An Attentional Multi-scale Co-evolving Model for Dynamic Link Prediction" (TheWebConf'23)☆11May 4, 2023Updated 2 years ago
- "SCONE: A Novel Stochastic Sampling to Generate Contrastive Views and Hard Negative Samples for Recommendation", WSDM 2025☆15Nov 25, 2025Updated 3 months ago
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Code for AAAI21 paper "Scalable and Explainable 1-Bit Matrix Completion via Graph Signal Learning"☆11Feb 15, 2022Updated 4 years ago
- This repository reproduces the results in the paper "How expressive are transformers in spectral domain for graphs?"(published in TMLR)☆12Jul 10, 2022Updated 3 years ago
- Python implementation of Spatial Analysis of Functional Enrichment (SAFE)☆46Aug 26, 2025Updated 6 months ago
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 6 years ago
- On the Robustness of Graph Neural Diffusion to Topology Perturbations☆16Nov 4, 2022Updated 3 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 3 years ago
- ParetoDrug☆10Sep 3, 2024Updated last year
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆12Sep 21, 2017Updated 8 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- In this project, Basic Machine Learning concepts were built on Desharnais dataset to built a software effort estimation model using a lin…☆10Nov 5, 2018Updated 7 years ago
- A PyTorch implementation of the paper https://arxiv.org/abs/1709.04875☆10Jul 22, 2020Updated 5 years ago
- BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented…☆12May 9, 2013Updated 12 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Apr 19, 2022Updated 3 years ago
- Official repository for the paper: "Trees with Attention for Set Prediction Tasks" (ICML21)☆10Jan 19, 2022Updated 4 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 8 years ago