Alternatives and similar repositories for niicat

Users that are interested in niicat are comparing it to the libraries listed below

• CCI-Bonn / HD-GLIO
  Automated deep-learning based brain tumor segmentation on MRI
  ☆35Updated 3 years ago
• CCI-Bonn / HD-BET
  Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …
  ☆37Updated 4 years ago
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆79Updated 6 months ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆79Updated last year
• rordenlab / NIfTIspace
  A single NIfTI image saved with all 48 spatial rotation permutations
  ☆30Updated 4 years ago
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆100Updated 2 weeks ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)
  ☆237Updated 3 weeks ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated this week
• raidionics / Raidionics
  Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
  ☆43Updated 4 months ago
• ErasmusMC-NeuroOnco / DeepDicomSort
  Automatic sorting of brain MRI scans by scan type
  ☆26Updated 10 months ago
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆81Updated 6 months ago
• BBillot / SynthSR
  A framework for joint super-resolution and image synthesis, without requiring real training data
  ☆177Updated last year
• CBICA / BrainMaGe
  Brain extraction in presence of abnormalities, using single and multiple MRI modalities
  ☆36Updated 7 months ago
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆105Updated 4 years ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆167Updated last week
• npnl / ATLAS
  A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.
  ☆83Updated 2 years ago
• viswanath-lab / RadQy
  RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…
  ☆107Updated 3 months ago
• volBrain / AssemblyNet
  AssemblyNet: 3D Whole Brain MRI segmentation pipeline
  ☆67Updated 2 years ago
• ad12 / DOSMA
  An AI-powered open-source medical image analysis toolbox
  ☆68Updated last year
• physimals / quantiphyse
  Application for analysis and modelling of volumetric medical imaging data
  ☆28Updated last year
• KCL-BMEIS / NiftySeg
  ☆30Updated 3 years ago
• msharrock / deepbleed
  DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials
  ☆29Updated last year
• BBillot / lab2im
  Library for generating images by sampling a GMM conditioned on label maps
  ☆27Updated last year
• balbasty / cornucopia
  An abundance of augmentation layers
  ☆17Updated 2 weeks ago
• JulianKlug / PerfusionCT-Net
  A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.
  ☆17Updated 6 months ago
• CCI-Bonn / HD-GLIO-AUTO
  Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
  ☆32Updated 3 years ago
• rohitrango / FireANTs
  Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration
  ☆62Updated 3 weeks ago
• icometrix / gmm-augmentation
  ☆22Updated 4 years ago
• sergivalverde / nicMSlesions
  Easy multiple sclerosis white matter lesion segmentation using convolutional deep neural networks.
  ☆50Updated 2 years ago
• SVRTK / SVRTK
  MIRTK based SVR reconstruction
  ☆61Updated 7 months ago