volBrain / AssemblyNetLinks
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
☆67Updated 2 years ago
Alternatives and similar repositories for AssemblyNet
Users that are interested in AssemblyNet are comparing it to the libraries listed below
Sorting:
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- White matter tractography clustering and more...☆79Updated 6 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆40Updated 9 months ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆240Updated 3 weeks ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆13Updated 4 months ago
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆28Updated 8 months ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆178Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆84Updated 2 weeks ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆109Updated 4 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 9 months ago
- ☆31Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆83Updated 2 weeks ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆113Updated last year
- Multi-task U-Net for the simultaneous segmentation and skull-stripping of mouse brain MRI☆23Updated 4 years ago
- A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature ca…☆29Updated 4 years ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆34Updated last year
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆57Updated 5 years ago
- Brain Extraction Tool in Python☆43Updated 9 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 4 months ago
- ☆30Updated 2 years ago
- perivascular space segmentation☆17Updated 3 years ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆159Updated this week
- Python utilities for medical image and surface-based analysis☆38Updated last week
- Automatic White Matter Bundle Segmentation☆249Updated 2 years ago
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆115Updated last week
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆30Updated 2 weeks ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆167Updated last year
- Deep Learning tools for brain medical images☆142Updated last year