volBrain / AssemblyNetLinks
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
☆65Updated 2 years ago
Alternatives and similar repositories for AssemblyNet
Users that are interested in AssemblyNet are comparing it to the libraries listed below
Sorting:
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆234Updated 3 weeks ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆39Updated 7 months ago
- White matter tractography clustering and more...☆80Updated 4 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆13Updated last month
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆77Updated 2 weeks ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆172Updated last year
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆107Updated 2 months ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆108Updated 10 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 6 months ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆34Updated 11 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 2 months ago
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆28Updated 6 months ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- This is a tool to quickly preview nifti images on the terminal☆65Updated 8 months ago
- A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature ca…☆29Updated 4 years ago
- Automatic White Matter Bundle Segmentation☆249Updated 2 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- Brain Extraction Tool in Python☆42Updated 7 months ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆37Updated 4 years ago
- perivascular space segmentation☆17Updated 3 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆29Updated 3 weeks ago
- Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.☆162Updated last year
- A project to provide custom sorting and renaming of dicom files☆79Updated 5 months ago
- Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…☆55Updated 5 years ago
- ☆29Updated last year
- Automated deep-learning based brain tumor segmentation on MRI☆35Updated 3 years ago
- MNI152 Template☆48Updated 5 years ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 7 months ago