BiomedSciAI / biomed-multi-alignmentLinks
We introduce ibm/biomed.omics.bl.sm.ma-ted-458m. A biomedical foundation model trained over 2 billion biological samples across multiple modalities, including proteins, small molecules, and single-cell gene data.
☆36Updated last month
Alternatives and similar repositories for biomed-multi-alignment
Users that are interested in biomed-multi-alignment are comparing it to the libraries listed below
Sorting:
- FuseMedML based molecular biochemistry library for drug discovery/repurposing☆22Updated 2 months ago
- This repository contains the implementation of the Multi-view Molecular Embedding with Late Fusion (MMELON) architecture. MMELON combines…☆33Updated this week
- ☆38Updated 7 months ago
- ATOMICA: Learning Universal Representations of Intermolecular Interactions☆149Updated last month
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆64Updated 2 months ago
- ☆40Updated 3 months ago
- Recursion's molecular foundation model☆50Updated this week
- BARTSmiles, generative masked language model for molecular representations☆33Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆59Updated last month
- ☆57Updated last year
- The Family of Diffusion Protein Language Models (DPLM)☆183Updated last week
- SELFormer: Molecular Representation Learning via SELFIES Language Models☆91Updated 6 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆92Updated last week
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆59Updated 2 weeks ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆112Updated this week
- In-silico design pipeline for evaluating protein structure diffusion models.☆24Updated 11 months ago
- A list of manuscripts/tools using diffusion on biological enttieis☆96Updated last year
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆122Updated last month
- ☆60Updated last week
- Multimodal encoder-only transformer model for image-based protein predictions☆15Updated last year
- Official implementation of "Learning the language of protein structures"☆32Updated this week
- ProtMamba: a homology-aware but alignment-free protein state space model☆66Updated this week
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆58Updated 3 months ago
- 🧿 Game-changing scripts for molecular visualization — produce Hollywood-quality visuals with scientific accuracy and cinematic impact 📽…☆29Updated last week
- Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)☆41Updated 3 weeks ago
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆98Updated 10 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆56Updated 3 months ago
- Molecular Out-Of-Distribution☆37Updated last month
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆171Updated last week