This repository contains the implementation of the Multi-view Molecular Embedding with Late Fusion (MMELON) architecture. MMELON combines molecular representations from three views — image, graph, and text —to learn a joint embedding that can be finetuned for downstream tasks in chemical and biological property prediction.
☆46Mar 4, 2026Updated 4 months ago
Alternatives and similar repositories for biomed-multi-view
Users that are interested in biomed-multi-view are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build foundation model for RNA or DNA data☆62Jul 19, 2026Updated last week
- Benchmark gene representations from different model families☆16May 29, 2025Updated last year
- We introduce ibm/biomed.omics.bl.sm.ma-ted-458m. A biomedical foundation model trained over 2 billion biological samples across multiple …☆119Updated this week
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated last month
- ☆13Jul 5, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- FuseMedML based molecular biochemistry library for drug discovery/repurposing☆25Mar 17, 2026Updated 4 months ago
- PDB-CAT aims to automatically categorize the mmCIF PDB structures based on the type of interaction between atoms in the protein and the l…☆15Jan 21, 2026Updated 6 months ago
- ☆14May 15, 2024Updated 2 years ago
- ☆13Oct 9, 2024Updated last year
- ☆18Aug 5, 2023Updated 2 years ago
- ☆15Sep 27, 2024Updated last year
- ☆12Dec 15, 2023Updated 2 years ago
- The repo consists of a Python package that works with functional data. In particular, it includes two distinct methodologies: Functional …☆14Sep 18, 2025Updated 10 months ago
- Extended version of the Chemprop framework that allows the calculation of atomistic and molecular Jazzy/Kallisto features.☆16Jan 10, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Repository for Worldwide Non-pharmaceutical Interventions Tracker for COVID19 (WNTRAC) dataset open sourced by IBM☆18Mar 29, 2022Updated 4 years ago
- ☆15Jul 7, 2024Updated 2 years ago
- GNN enabled surrogate modeling for chemical docking☆16Nov 3, 2022Updated 3 years ago
- ChemPile project☆19Jul 31, 2025Updated 11 months ago
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Apr 19, 2024Updated 2 years ago
- SIEVE-Score: interaction energy-based virtual screening method based on random forest.☆14Sep 15, 2023Updated 2 years ago
- ImageMol is a molecular image-based pre-training deep learning framework for computational drug discovery.☆56Feb 27, 2025Updated last year
- A repository of the analysis and simulation tools for biomolecular modeling, simulations and drug discovery☆13Mar 7, 2025Updated last year
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Galaxy Tools for Computational Chemistry☆16Mar 25, 2025Updated last year
- ☆11Sep 23, 2024Updated last year
- Orbital viewer (mirror of https://gitlab.com/Jellby/Pegamoid)☆17Jul 7, 2026Updated 3 weeks ago
- The data and standalone program of ESM-DBP☆10Jun 25, 2024Updated 2 years ago
- ☆14Jul 24, 2023Updated 3 years ago
- BioPython/scikit-bio tutorial for EuroSciPy 2018☆13Aug 27, 2018Updated 7 years ago
- ☆16Oct 8, 2023Updated 2 years ago
- ☆16Aug 14, 2019Updated 6 years ago
- Source code accompanying the 'Transfer learning with graph neural networks for improved molecular property prediction in the multi-fideli…☆39Jun 28, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆13Jun 10, 2025Updated last year
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 4 months ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆15Nov 30, 2022Updated 3 years ago
- [ICLR 2024] ProFSA: Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment☆22Jun 3, 2024Updated 2 years ago
- Quantum Mechanical Bespoke Force Field Derivation Toolkit☆15Jun 23, 2020Updated 6 years ago
- A Sequence Generation Model for Reaction Diagram Parsing☆28Jun 30, 2025Updated last year
- ☆25Jan 22, 2025Updated last year