AnneChao / SpadeRLinks
SpadeR provides simple R functions to compute various biodiversity indices and related (dis)similarity measures based on individual-based (abundance) data or sampling-unit-based (incidence) data taken from one or multiple communities/assemblages.
☆29Updated 7 years ago
Alternatives and similar repositories for SpadeR
Users that are interested in SpadeR are comparing it to the libraries listed below
Sorting:
- ☆36Updated 11 months ago
- R tools for integrating phylogenies and ecology☆36Updated last year
- An R package for the spatial analysis of population genetic data.☆20Updated 4 months ago
- Links for Ecology and Evolution☆23Updated 6 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last month
- a take on ordination plots using ggplot2☆66Updated last year
- scatter pie plot☆66Updated last month
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆36Updated 2 months ago
- An R pakage to calculate diversity through Hill Numbers☆34Updated last year
- Analysis of Phylogenetics and Evolution☆73Updated 4 months ago
- A textbook for phylogenetic comparative methods.☆44Updated 6 years ago
- Software for the Analysis of Phylogenetic Community Structure and Character Evolution, with Phylomatic☆43Updated 2 years ago
- population genetic simulations with R and Shiny☆28Updated 11 months ago
- babette is an R package to work with BEAST2☆46Updated this week
- Phylogenetic ANalyses of DiversificAtion☆24Updated last month
- Exploring the Phylogenetic Signal in Continuous Traits☆18Updated 4 months ago
- This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…☆68Updated last year
- Functions for phylogenetic analyses☆36Updated last month
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆25Updated 3 months ago
- Biology 202 Course Website☆18Updated 5 years ago
- ☆19Updated last month
- Code to run the shiny functions for the MASAME suite☆28Updated 5 years ago
- Interface to Open Tree of Life API☆45Updated 2 years ago
- Species richness with high diversity☆67Updated 2 months ago
- R Interfaces to Phylogenetic Software☆12Updated last month
- A model-based visualization method for microbiome data☆16Updated this week
- A Toolbox for Manipulating Biological Sequences in R☆26Updated last month
- A book for teaching people how to do comparative methods in R☆22Updated 2 years ago
- An Amazing Shiny App☆17Updated 4 years ago
- Package for multi-environment trial analysis☆37Updated last year