Alternatives and similar repositories for pcurvepy

Users that are interested in pcurvepy are comparing it to the libraries listed below

• kasparmartens / NeuralDecomposition
  PyTorch implementation of the paper "Neural Decomposition: Functional ANOVA with Variational Autoencoders"
  ☆25Updated 5 years ago
• davisidarta / topometry
  Systematically learn and evaluate manifolds from high-dimensional data
  ☆104Updated 3 months ago
• lilab-bcb / nmf-torch
  ☆11Updated 8 months ago
• tlubitz / parameter_balancing
  Software tool for metabolic modelling in Systems Biology
  ☆10Updated 5 years ago
• KrishnaswamyLab / DiffusionEMD
  Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings
  ☆38Updated last year
• msmdev / pyGPCCA
  pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…
  ☆26Updated 9 months ago
• p3732 / gpumap
  GPU-Parallelized UMAP
  ☆52Updated 6 years ago
• artusoma / prinPy
  Simple Principal Curves in Python
  ☆33Updated 4 years ago
• berenslab / ne-spectrum
  Attraction-Repulsion Spectrum in Neighbor Embeddings
  ☆31Updated 3 years ago
• aidos-lab / dect-evaluation
  Differentiable Euler Characteristic Transform
  ☆17Updated last year
• cantinilab / OT-scOmics
  This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in…
  ☆43Updated 2 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆61Updated 4 years ago
• samirchowdhury / HyperCOT
  Code for computing Hypergraph Co-Optimal Transport distances
  ☆17Updated 3 years ago
• BorgwardtLab / HOGImine
  Higher-order genetic interaction discovery with network-based biological priors.
  ☆13Updated last year
• jmbr / diffusion-maps
  Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps
  ☆42Updated 4 years ago
• KrishnaswamyLab / graphtools
  Tools for building and manipulating graphs in Python
  ☆46Updated last month
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆16Updated 2 years ago
• labsyspharm / visinity
  ☆17Updated last year
• auranic / Elastic-principal-graphs
  Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method
  ☆14Updated 3 years ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 5 years ago
• LuisScoccola / persistable
  density-based clustering for exploratory data analysis based on multi-parameter persistence
  ☆42Updated 6 months ago
• KrishnaswamyLab / TrajectoryNet
  TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
  ☆130Updated last year
• ManchesterBioinference / GPcounts
  Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods
  ☆23Updated 11 months ago
• PythonOT / COOT
  CO-Optimal Transport
  ☆42Updated 5 years ago
• dkobak / tsne-umap-init
  Initialization is critical for preserving global data structure in both t-SNE and UMAP
  ☆24Updated 4 years ago
• jssong-lab / maxEnt
  ☆11Updated 8 years ago
• hetio / xswap
  Python library (C++ backend) for degree-preserving network randomization
  ☆14Updated 6 years ago
• tensorly / viz
  Easy visualization and evaluation of matrix and tensor factorization models
  ☆17Updated 3 weeks ago
• ppsp-team / StratiPy
  Graph regularized nonnegative matrix factorization (GNMF) in Python
  ☆46Updated 5 years ago
• andrewcharlesjones / spatial-alignment
  Alignment of spatial genomics data using deep Gaussian processes
  ☆32Updated 3 years ago