Alternatives and similar repositories for diffusion-maps

Users that are interested in diffusion-maps are comparing it to the libraries listed below

• DiffusionMapsAcademics / pyDiffMap
  Library for diffusion maps
  ☆46Updated 3 years ago
• SheffieldML / GPclust
  Collapsed Variational Bayes
  ☆72Updated 6 years ago
• fabian-sp / GGLasso
  A Python package for General Graphical Lasso computation
  ☆39Updated 9 months ago
• hsidky / dmaps
  C++ Accelerated Python Diffusion Maps Library
  ☆23Updated 7 years ago
• hagax8 / ugtm
  ugtm: a Python package for Generative Topographic Mapping
  ☆51Updated 4 years ago
• redst4r / pyDiffusionMaps
  Diffusion maps for python
  ☆12Updated 5 years ago
• eth-cscs / abcpy
  ABCpy package
  ☆116Updated last year
• msmdev / pyGPCCA
  pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…
  ☆25Updated 8 months ago
• lujonathanh / BETS
  Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…
  ☆20Updated 2 years ago
• mstrazar / iONMF
  Integrative orthogonal non-negative matrix factorization
  ☆32Updated 6 years ago
• eltrompetero / coniii
  Convenient Interface to Inverse Ising (ConIII)
  ☆21Updated 2 months ago
• tlubitz / parameter_balancing
  Software tool for metabolic modelling in Systems Biology
  ☆10Updated 4 years ago
• msmbuilder / vde
  Variational Autoencoder for Dimensionality Reduction of Time-Series
  ☆189Updated 3 years ago
• ThomasBrouwer / BNMTF
  Python code for "Fast Bayesian nonnegative matrix factorisation and tri-factorisation", presented at NIPS 2016 Workshop on Advances in Ap…
  ☆20Updated 7 years ago
• KrishnaswamyLab / DiffusionEMD
  Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings
  ☆38Updated last year
• LCSL / FALKON_paper
  FALKON implementation used in the experimental section of "FALKON: An Optimal Large Scale Kernel Method"
  ☆30Updated 5 years ago
• clarafy / conformal-for-design
  ☆29Updated 3 years ago
• erichson / ristretto
  Randomized Dimension Reduction Library
  ☆117Updated 4 years ago
• ur-whitelab / maxent
  MaxEnt code for fitting simulation outcomes/statistical models to observations
  ☆16Updated 3 years ago
• kasparmartens / NeuralDecomposition
  PyTorch implementation of the paper "Neural Decomposition: Functional ANOVA with Variational Autoencoders"
  ☆25Updated 5 years ago
• rmcgibbo / logsumexp
  Fast SSE logsumexp for python/numpy
  ☆30Updated 10 years ago
• youlab / pattern_prediction_NN_Shangying
  Use LSTM neural network for 1D distributional data prediction
  ☆22Updated 3 years ago
• lawrennd / old_talks
  Talks from Neil Lawrence
  ☆54Updated 2 years ago
• sissa-data-science / DADApy
  Distance-based Analysis of DAta-manifolds in python
  ☆136Updated 2 months ago
• bhmm / bhmm
  Bayesian hidden Markov models toolkit
  ☆47Updated 5 years ago
• liuyxpp / mpltex
  A python package for producing publication quality images using matplotlib.
  ☆104Updated 5 years ago
• crisbodnar / dgm
  Deep Graph Mapper: Seeing Graphs through the Neural Lens
  ☆58Updated 2 years ago
• largelymfs / DeepFold
  Learning structural motif representations for efficient protein structure search
  ☆19Updated 8 years ago
• NikolayOskolkov / tSNE_vs_UMAP_GlobalStructure
  Here we address the global structure preservation by tSNE and UMAP
  ☆47Updated 5 years ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 4 years ago