End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.
☆35Jun 30, 2021Updated 4 years ago
Alternatives and similar repositories for OmiVAE
Users that are interested in OmiVAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multi-task deep learning framework for multi-omics data analysis☆53May 5, 2022Updated 4 years ago
- ☆10Feb 3, 2020Updated 6 years ago
- HyperTMO: A trusted multi-omics integration framework based on Hypergraph convolutional network for patient classification☆12Apr 1, 2024Updated 2 years ago
- An interpretable deep learning model for cancer classification using high-dimensional omics data☆18Jan 24, 2022Updated 4 years ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is multi-omics data integrative analysis framework for classification tasks in biomedi…☆17Mar 27, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆164May 17, 2022Updated 4 years ago
- ☆12Feb 10, 2023Updated 3 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- TCGA Benchmark Tasks for Clinical Attribute Prediction based on Genome☆14Mar 16, 2021Updated 5 years ago
- Multi-omics integration method using AE and GCN☆41Jun 7, 2023Updated 3 years ago
- This repository contains the source code of the revised version of MutPanning. MutPanning is publicly available under the BSD3-Clause ope…☆13Nov 12, 2019Updated 6 years ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆183Mar 31, 2021Updated 5 years ago
- OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data☆11Feb 28, 2023Updated 3 years ago
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆12Dec 9, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Aug 13, 2021Updated 4 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆19Apr 10, 2023Updated 3 years ago
- A deep-learning framework for multi-omics integration☆32Updated this week
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Oct 26, 2024Updated last year
- A Variational Information Bottleneck Approach to Multi-Omics Data Integration☆24May 11, 2021Updated 5 years ago
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆97Oct 28, 2024Updated last year
- 记录有用的Git repos☆12Jul 28, 2024Updated last year
- ☆12Apr 17, 2019Updated 7 years ago
- Regularization paths for regression models with grouped covariates☆35Jun 10, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆11Apr 1, 2024Updated 2 years ago
- BERMUDA (Batch Effect ReMoval Using Deep Autoencoders) is a novel transfer-learning-based method for batch correction in scRNA-seq data.☆30Dec 29, 2019Updated 6 years ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆27Sep 17, 2024Updated last year
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- using shallow neural network layer (embedding) to infer gene-gene/sample relationship from gene expression data☆21Nov 16, 2018Updated 7 years ago
- ☆11Feb 14, 2019Updated 7 years ago
- Implementation for Hyper-Laplacian Regularized Multi-View Clustering with Exclusive L21 Regularization and Tensor Log-Determinant Minimiz…☆12Mar 22, 2023Updated 3 years ago
- 命例☆10Sep 27, 2018Updated 7 years ago
- Robust Unsupervised Feature Selection via Multi-Group Adaptive Graph Representation☆13Mar 6, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Discriminative Feature Selection via A Structured Sparse Subspace Learning Module☆12Apr 15, 2022Updated 4 years ago
- The repository for various machine learning POC☆28May 24, 2021Updated 5 years ago
- A library implementing various linear sparse fitting techniques. Uses Tensorflow for running on GPU.☆14Dec 25, 2016Updated 9 years ago
- This repo contains source code and datasets used in code for Deep transfer learning enables lesion tracing of circulating tumor cells(CTC…☆12Jun 26, 2023Updated 2 years ago
- ☆35Jul 21, 2021Updated 4 years ago
- Deep Embedded Multi-view Clustering with Collaborative Training☆38Apr 7, 2022Updated 4 years ago
- flask+bootstrap实现的web小应用，实现了全文检索（拼写检查及纠错、倒排索引、tf-idf文档排序） 和文章浏览（文章简介、阅读原文）☆16Dec 8, 2022Updated 3 years ago