xing-lab-pitt / mosaic-picasso
☆14Updated last year
Alternatives and similar repositories for mosaic-picasso:
Users that are interested in mosaic-picasso are comparing it to the libraries listed below
- Deconvolution of widefield microscopy images and generation of point spread functions☆45Updated this week
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated last month
- Development of PICASSO plugin for napari☆14Updated 2 years ago
- ☆20Updated 11 months ago
- MSSR Plugin☆13Updated 4 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 weeks ago
- Neuroclear is a deep-learning-based Python module to train a deep neural network for the task of applying super-resolution to degraded ax…☆29Updated this week
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 4 months ago
- ☆12Updated 10 months ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆33Updated 2 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 3 months ago
- Tools for distributed alignment of massive images☆80Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated 3 weeks ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 9 months ago
- Whole slide image registration through wsireg in napari.☆13Updated last year
- code of the registration and deconvolution project☆34Updated 3 years ago
- Browse your OMERO database from within napari.☆36Updated this week
- A napari plugin for clustering objects according to their properties.☆82Updated last week
- A collection of useful python utilities from True North Intelligent Algorithms☆33Updated this week
- The ImageJ wiki☆27Updated this week
- StarDist plugin for napari☆37Updated 6 months ago
- Accurate and efficient spot detection for microscopy data☆70Updated this week
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆61Updated this week
- A python library for advanced lattice light-sheet image analysis☆21Updated 4 years ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆33Updated 3 months ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated this week