Alternatives and similar repositories for mosaic-picasso

Users that are interested in mosaic-picasso are comparing it to the libraries listed below

• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆25Updated last month
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆87Updated last month
• elgw / deconwolf
  Deconvolution of widefield microscopy images and generation of point spread functions
  ☆54Updated this week
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 6 months ago
• cgohlke / roifile
  Read and write ImageJ ROI format.
  ☆75Updated 5 months ago
• stegmaierj / Cellpose3D
  3D Extension of the Cellpose Algorithm by Stringer et al., 2021.
  ☆35Updated 3 years ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆88Updated 2 weeks ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆88Updated this week
• saalfeldlab / stitching-spark
  Reconstruct big images from overlapping tiled images on a Spark cluster.
  ☆34Updated 2 years ago
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆27Updated 5 years ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆69Updated 3 weeks ago
• labsyspharm / ashlar
  ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
  ☆152Updated 2 months ago
• adanog / MSSR
  MSSR Plugin
  ☆14Updated last year
• MicroscPSF / MicroscPSF-Py
  Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
  ☆45Updated last year
• haesleinhuepf / stackview
  Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
  ☆169Updated 5 months ago
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆86Updated last week
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆58Updated 3 months ago
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆77Updated last month
• HenriquesLab / NanoJ-eSRRF
  ☆21Updated 5 months ago
• macronucleus / Chromagnon
  Image correction software for chromatic shifts in fluorescence microscopic images
  ☆25Updated 2 weeks ago
• zeiss-microscopy / OAD
  Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…
  ☆150Updated last week
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆51Updated 2 years ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆52Updated 5 months ago
• sakoho81 / miplib
  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
  ☆81Updated 2 months ago
• constantinpape / elf
  Utils and convenience functions for large-scale bio-image analysis.
  ☆58Updated 2 months ago
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆29Updated 5 months ago
• nygctech / PICASSO
  Development of PICASSO plugin for napari
  ☆16Updated 2 years ago
• pylattice / pyLattice
  A python library for advanced lattice light-sheet image analysis
  ☆21Updated 5 years ago