Tools for user-free preprocessing of cryo-EM datasets
☆27Nov 22, 2022Updated 3 years ago
Alternatives and similar repositories for Automatic-cryoEM-preprocessing
Users that are interested in Automatic-cryoEM-preprocessing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cryo-EM micrograph segmentation through deep learning☆22Oct 10, 2025Updated 5 months ago
- Conventions for 3DEM software packages☆19Feb 22, 2022Updated 4 years ago
- Badly written scripts for making cryoEM easier☆13Dec 15, 2020Updated 5 years ago
- A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.☆156Jan 25, 2021Updated 5 years ago
- Scripts and Tools for Electron Microscopy Image Analysis.☆11Nov 25, 2025Updated 3 months ago
- Python scripts for easy RELION STAR file manipulation.☆24Jan 21, 2026Updated 2 months ago
- A CNN for denoising cryo-EM images☆13Dec 9, 2019Updated 6 years ago
- Python library that enables scripting access to CryoSPARC, a cryo-EM software package.☆46Mar 12, 2026Updated last week
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated last month
- Real-time object locator / evaluator for cryo-EM data collection☆12Dec 7, 2024Updated last year
- scripts to monitor cryo-em jobs☆10Sep 29, 2021Updated 4 years ago
- Colorblind-friendly, perceptually uniform palettes for chimerax☆14Sep 26, 2020Updated 5 years ago
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- A Docker-based distribution of Appion-Protomo.☆11Oct 23, 2020Updated 5 years ago
- A scientific image processing software suite with a focus on CryoEM and CryoET☆166Updated this week
- Public release of Ptolemy package for automated targeting of Cryo-EM grids☆18Mar 9, 2025Updated last year
- Amortized inference for ab initio heterogeneous cryo-EM reconstruction☆42Apr 11, 2023Updated 2 years ago
- Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled …☆208Jan 27, 2026Updated last month
- ☆19Jan 23, 2026Updated 2 months ago
- cryo-ET particle picking by representation and metric learning☆42Nov 24, 2025Updated 3 months ago
- Ice gradient estimation for cryoEM☆11Oct 11, 2024Updated last year
- Cryo-EM data viewer in napari☆14Dec 1, 2020Updated 5 years ago
- Self-supervised deep learning framework for CryoET analysis☆20Feb 18, 2026Updated last month
- cryoID identifies the protein(s) in unknown near-atomic resolution cryoEM density maps from a pool of candidate proteins.☆13Dec 1, 2019Updated 6 years ago
- ☆44Oct 30, 2023Updated 2 years ago
- Simplified version of "Single-particle processing in RELION-3.0" tutorial.☆34Sep 23, 2021Updated 4 years ago
- Singularity image for cryo-CARE☆37Jan 7, 2022Updated 4 years ago
- Image-processing software for cryo-electron microscopy☆526Updated this week
- Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning☆18Nov 21, 2025Updated 4 months ago
- Python scripts to manipulate Relion tomo STAR files and much more...☆14Sep 12, 2025Updated 6 months ago
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 3 years ago
- New program to follow Relion projects in a browser!☆47Jan 5, 2026Updated 2 months ago
- Tensorflow implementation of Spatial VAE via Matrix-Variate Normal Distributions☆14May 24, 2017Updated 8 years ago
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 2 months ago
- Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms☆31Jul 17, 2025Updated 8 months ago
- PIP package of cryoCARE☆46Apr 2, 2024Updated last year
- Parallel cryo electron tomography via beam image shift☆40Feb 17, 2026Updated last month
- ☆17Oct 21, 2024Updated last year
- A collaborative knowledge sharing platform for the cryo-ET community☆20Aug 7, 2024Updated last year