arne-cl / ppi_graphkernelLinks
all-paths graph kernel for protein-protein interaction extraction
☆12Updated 11 years ago
Alternatives and similar repositories for ppi_graphkernel
Users that are interested in ppi_graphkernel are comparing it to the libraries listed below
Sorting:
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆24Updated 9 years ago
- OhmNet: Representation learning in multi-layer graphs☆84Updated 5 years ago
- SmuDGE: Semantic Disease Gene Embeddings☆12Updated 7 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Graph Feature Representation/Vector Based On The Family Of Graph Spectral Distances (NIPS 2017).☆24Updated 5 years ago
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆20Updated 8 years ago
- ☆34Updated 7 years ago
- Miscellaneous tools for clinical ML☆29Updated 8 years ago
- Crowdsourced data for open domain relation classification from sentences☆20Updated 7 years ago
- ☆11Updated 7 years ago
- This implements variational inference for the correlated topic model.☆21Updated 11 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- code for paper "Attributed Network Embedding via Subspace Discovery"☆21Updated 7 years ago
- COVID-19 corpus with annotated biomedical entities.☆11Updated 4 years ago
- word vector library☆34Updated 6 years ago
- node2vec implementation in C++☆53Updated 5 years ago
- Learning graph embedding using DeepWalk or Node2Vec☆15Updated 9 years ago
- ☆17Updated 6 years ago
- Scalable tensor factorization☆54Updated 10 years ago
- NLP framework in python for entity recognition and relationship extraction☆115Updated 3 years ago
- ☆17Updated 6 years ago
- Nonparametric Topic Modeling with Word Vectors☆75Updated 8 years ago
- Robust Ensemble of SVMs☆21Updated 11 years ago
- ☆26Updated 8 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- OAQA Biomedical Question Answering (BioASQ) System☆37Updated 8 years ago
- ☆53Updated 8 years ago
- mixed membership stochastic block model☆13Updated 9 years ago
- Python Module for decision tree based hierarchical multi-classification☆41Updated 8 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Updated 6 years ago