arne-cl / ppi_graphkernelLinks
all-paths graph kernel for protein-protein interaction extraction
☆12Updated 11 years ago
Alternatives and similar repositories for ppi_graphkernel
Users that are interested in ppi_graphkernel are comparing it to the libraries listed below
Sorting:
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆19Updated 8 years ago
- SmuDGE: Semantic Disease Gene Embeddings☆12Updated 7 years ago
- Crowdsourced data for open domain relation classification from sentences☆20Updated 6 years ago
- node2vec implementation in C++☆53Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆25Updated 9 years ago
- Python Module for decision tree based hierarchical multi-classification☆41Updated 8 years ago
- OhmNet: Representation learning in multi-layer graphs☆83Updated 5 years ago
- ☆34Updated 7 years ago
- Python library for training a covariate shift estimator☆13Updated 6 years ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- Graph Feature Representation/Vector Based On The Family Of Graph Spectral Distances (NIPS 2017).☆24Updated 5 years ago
- ☆24Updated 6 years ago
- DeepDive Biomedical Tools☆14Updated 8 years ago
- Learning to represent shortest paths and other graph-based measures of node similarities with graph embeddings☆33Updated 6 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆29Updated 7 years ago
- ☆17Updated 5 years ago
- Nonparametric Topic Modeling with Word Vectors☆74Updated 8 years ago
- Learning graph embedding using DeepWalk or Node2Vec☆15Updated 8 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Updated 6 years ago
- Code for the icml paper "zero inflated exponential family embedding"☆29Updated 7 years ago
- Predicting adverse drug reactions from a knowledge graph☆28Updated 4 years ago
- Tools for working with the S800 corpus☆11Updated 5 years ago
- code for paper "Attributed Network Embedding via Subspace Discovery"☆21Updated 6 years ago
- NLP framework in python for entity recognition and relationship extraction☆115Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- This implements variational inference for the correlated topic model.☆21Updated 10 years ago
- Neural Tensor Network Implementation as a keras layer☆59Updated 8 years ago
- ☆122Updated 7 years ago
- Scalable GP Adapter for Time Series Classification☆13Updated 8 years ago