CCI-Bonn / HD-BETLinks
Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the presence of pathology or treatment-induced tissue alterations.
☆37Updated 4 years ago
Alternatives and similar repositories for HD-BET
Users that are interested in HD-BET are comparing it to the libraries listed below
Sorting:
- Automated deep-learning based brain tumor segmentation on MRI☆37Updated 3 years ago
- A project to provide custom sorting and renaming of dicom files☆82Updated 7 months ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆237Updated this week
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆81Updated last year
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- This is a tool to quickly preview nifti images on the terminal☆66Updated 10 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆108Updated 4 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 8 months ago
- PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…☆104Updated 4 years ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆32Updated 3 years ago
- Easy multiple sclerosis white matter lesion segmentation using convolutional deep neural networks.☆50Updated 2 years ago
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆159Updated 3 years ago
- Automatic White Matter Bundle Segmentation☆249Updated 2 years ago
- Deep Whole Brain Segmentation Using SLANT Method☆128Updated 2 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- Very fast greedy diffeomorphic registration code☆82Updated 6 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 3 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆41Updated 8 months ago
- MIRTK based SVR reconstruction☆62Updated 8 months ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆178Updated last year
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆40Updated last week
- Robust Brain Extraction Tool for CT Head Images☆50Updated 5 years ago
- Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…☆208Updated 7 years ago
- ☆30Updated 3 years ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆55Updated 4 months ago
- An AI-powered open-source medical image analysis toolbox☆70Updated last year
- A single NIfTI image saved with all 48 spatial rotation permutations☆30Updated 4 years ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆67Updated 2 years ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17Updated 7 months ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆71Updated last month