CCI-Bonn / HD-BET
Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the presence of pathology or treatment-induced tissue alterations.
☆34Updated 3 years ago
Alternatives and similar repositories for HD-BET:
Users that are interested in HD-BET are comparing it to the libraries listed below
- Automated deep-learning based brain tumor segmentation on MRI☆28Updated 2 years ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆27Updated 2 years ago
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- Library for generating images by sampling a GMM conditioned on label maps☆23Updated 11 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 8 months ago
- This is a tool to quickly preview nifti images on the terminal☆59Updated last month
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆29Updated 3 months ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆70Updated 7 months ago
- ☆27Updated 3 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆37Updated 3 weeks ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆34Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated this week
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆98Updated last week
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆27Updated last year
- A framework for joint super-resolution and image synthesis, without requiring real training data☆157Updated 11 months ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆82Updated 2 years ago
- ☆19Updated 3 years ago
- Multi-site dMRI harmonization☆47Updated this week
- quick segmentation of the hippocampus from T1 MRI images. (pytorch version)☆26Updated 2 years ago
- Easy multiple sclerosis white matter lesion segmentation using convolutional deep neural networks.☆47Updated last year
- Pre-trained models and utilities for deep learning on medical images in Python☆211Updated last week
- High-throughput Python platform for image reconstruction and analysis☆44Updated 3 months ago
- MIRTK based SVR reconstruction☆50Updated 4 months ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆15Updated 7 months ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆29Updated 3 years ago
- PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…☆103Updated 4 years ago
- CONSNet: Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver Standard Masks☆17Updated 5 years ago
- Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000☆57Updated 3 years ago
- Brain Hippocampus Segmentation☆34Updated 5 years ago
- Code for implementation of Unlearning Scanner Bias for MRI Harmonisation☆27Updated 3 years ago