CCI-Bonn / HD-BETLinks
Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the presence of pathology or treatment-induced tissue alterations.
☆37Updated 4 years ago
Alternatives and similar repositories for HD-BET
Users that are interested in HD-BET are comparing it to the libraries listed below
Sorting:
- Automated deep-learning based brain tumor segmentation on MRI☆35Updated 3 years ago
- This is a tool to quickly preview nifti images on the terminal☆66Updated 9 months ago
- Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)☆32Updated 3 years ago
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆237Updated 3 weeks ago
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- Automatic White Matter Bundle Segmentation☆249Updated 2 years ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆177Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆79Updated last year
- PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…☆105Updated 4 years ago
- A project to provide custom sorting and renaming of dicom files☆79Updated 6 months ago
- Brain extraction in presence of abnormalities, using single and multiple MRI modalities☆36Updated 7 months ago
- Easy multiple sclerosis white matter lesion segmentation using convolutional deep neural networks.☆50Updated 2 years ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆107Updated 3 months ago
- Deep Whole Brain Segmentation Using SLANT Method☆128Updated last year
- Very fast greedy diffeomorphic registration code☆81Updated 6 months ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆40Updated last year
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials☆29Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆77Updated this week
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated 2 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆13Updated 2 months ago
- ☆30Updated 3 years ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆67Updated 2 years ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆30Updated 4 years ago
- Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI☆24Updated 3 years ago
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆174Updated last month
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆40Updated 7 months ago
- MIRTK based SVR reconstruction☆61Updated 7 months ago
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆156Updated 3 years ago
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆109Updated 11 months ago