Alternatives and similar repositories for CNS

Users that are interested in CNS are comparing it to the libraries listed below

• isdneuroimaging / psmd
  Peak width of Skeletonized Mean Diffusivity (PSMD)
  ☆15Updated last week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆67Updated 2 weeks ago
• evavanheese / DTI-ALPS
  DTI-ALPS: diffusion tensor imaging along the perivascular space
  ☆17Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 4 months ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆70Updated 2 months ago
• mvgolub / FW-DTI-Beltrami
  ☆13Updated 2 years ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆42Updated 3 years ago
• treanus / KUL_Linux_Installation
  Automated installation of neuro-imaging software on a Linux Mint 20 or Ubuntu 20.04 system
  ☆11Updated last year
• ahzhu / eharmonize
  ☆10Updated 8 months ago
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 3 years ago
• RafaelRomeroGarcia / subParcellation
  Subdivides the surface-based Desikan-Killiany atlas into equally sized regions. Please cite: Romero-Garcia R, Atienza M, Clemmensen LH, C…
  ☆17Updated last month
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆34Updated last year
• SPMIC-UoN / XTRACT_atlases
  WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …
  ☆17Updated 3 years ago
• DiedrichsenLab / cerebellar_atlases
  ☆43Updated last month
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 8 months ago
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆25Updated 2 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 9 months ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆55Updated last month
• atdemarco / svrlsmgui
  A graphical multivariate lesion-symptom mapping toolbox
  ☆11Updated 3 months ago
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆40Updated last week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆52Updated 2 weeks ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆29Updated 4 months ago
• pboutinaud / SHiVAi
  The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
  ☆19Updated 3 weeks ago
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆16Updated 2 years ago
• vzachari / IronSmithQSM
  Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…
  ☆25Updated last year
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆45Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated this week
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆17Updated last year