Alternatives and similar repositories for braincolor

Users that are interested in braincolor are comparing it to the libraries listed below

• BIC-MNI / minc
  OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…
  ☆35Updated 8 years ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆49Updated last year
• cookpa / pipedream
  PipeDream - open source neuroimaging pipelines
  ☆16Updated 5 years ago
• Mouse-Imaging-Centre / pydpiper
  Python code for flexible pipeline control
  ☆26Updated 2 years ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆25Updated 7 years ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆75Updated 6 months ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆122Updated last year
• nipy / quickshear
  Quickshear Defacing for Neuroimages
  ☆11Updated 2 years ago
• Inria-Asclepios / simul-atrophy
  Atrophy simulation from Inria Asclepios
  ☆10Updated 5 years ago
• nipy / mindboggle
  Automated anatomical brain label/shape analysis software (+ website)
  ☆149Updated 4 years ago
• nipy / nilabels
  Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.
  ☆21Updated last month
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆16Updated 3 years ago
• preprocessed-connectomes-project / NFB_skullstripped
  Repository of hand corrected skullstripping for the Enhanced Rockland Sample Neurofeedback Study
  ☆19Updated 4 years ago
• stnava / ANTsDoc
  Documentation for ANTs
  ☆16Updated 10 years ago
• dorianps / LINDA
  Lesion Identification with Neighborhood Data Analysis
  ☆21Updated 5 years ago
• TJKlein / DeepNAT
  ☆19Updated 8 years ago
• demianw / tract_querier
  Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
  ☆29Updated 2 weeks ago
• scilus / fibernavigator
  The original Fibernavigator: tool for vizualization of DTI and MRI data
  ☆36Updated 6 years ago
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆76Updated last year
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆57Updated 9 months ago
• sammba-mri / sammba-mri
  small mammals brain MRI
  ☆16Updated last year
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆109Updated last year
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆38Updated last year
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆128Updated 6 years ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated last year
• Aswendt-Lab / AIDAmri
  Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain
  ☆30Updated 3 months ago
• wanderine / BROCCOLI
  BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs
  ☆117Updated 4 years ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆44Updated 12 years ago
• nmpowell / mousemorph
  Tools for MRI mouse brain morphometry
  ☆31Updated 8 years ago