benoitberanger / niix2bidsLinks
Automatic BIDS architecture
☆15Updated last year
Alternatives and similar repositories for niix2bids
Users that are interested in niix2bids are comparing it to the libraries listed below
Sorting:
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated last month
- Preprocessing of arterial spin labeling (ASL) data☆52Updated 2 weeks ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆67Updated 2 weeks ago
- Processing tools for high-resolution neuroimaging☆73Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last month
- ☆39Updated 3 years ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated this week
- SPM Notebooks☆11Updated 2 years ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated 2 months ago
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆25Updated 2 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆79Updated 4 months ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆31Updated last year
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated 2 weeks ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 2 weeks ago
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated 3 weeks ago
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts☆11Updated last year
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated 3 weeks ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17Updated last year
- Preprocessing of diffusion MRI☆169Updated this week
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆102Updated this week
- Automated installation of neuro-imaging software on a Linux Mint 20 or Ubuntu 20.04 system☆11Updated last year
- fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI☆36Updated last month
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆47Updated this week
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆47Updated 2 months ago
- ASL pipeline for the Human Connectome Project☆11Updated 2 months ago
- A twolevel deformation based morphometry pipeline using ants☆13Updated 6 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆106Updated last week
- CIVET Installer☆29Updated 3 years ago