pnlbwh / old-pnlpipeLinks
Do not use this old repository. Instead, use https://github.com/pnlbwh/luigi-pnlpipe & https://github.com/pnlbwh/pnlNipype
☆12Updated 5 months ago
Alternatives and similar repositories for old-pnlpipe
Users that are interested in old-pnlpipe are comparing it to the libraries listed below
Sorting:
- Multi-site dMRI harmonization☆48Updated 3 months ago
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆19Updated 10 months ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensiti…☆22Updated last week
- White matter tractography clustering and more...☆77Updated 2 months ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- iBEAT V2.0 Docker☆13Updated 3 months ago
- CNN based brain masking☆18Updated 2 months ago
- ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject☆10Updated last year
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- Automated subdivision of white matter hyperintensities☆12Updated 3 years ago
- Simulate realistic diffusion-weighted MR data☆19Updated 2 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆52Updated last year
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆107Updated 8 months ago
- [MedIA 2023] "Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learn…☆24Updated 2 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- perivascular space segmentation☆16Updated 2 years ago
- A radiomics tool with a variety of brain MRI processing functions, including affine registration, hippocampus segmentation and feature ca…☆29Updated 4 years ago
- A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.☆83Updated 2 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆39Updated last week
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 3 months ago
- structural analysis of neonatal brain MRI scans☆56Updated 4 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆74Updated 3 weeks ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆68Updated 2 years ago
- Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps☆14Updated last year
- NIST-MNI image processing pipelines☆12Updated last week
- MATLAB code for Multidimensional Diffusion MRI☆46Updated 3 months ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆65Updated 2 years ago
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆26Updated 2 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- Automated Fiber Quantification☆77Updated last year