AhsenChaudhry / Mitochondria-AnalyzerLinks
Mitochondria Analyzer
☆22Updated 2 years ago
Alternatives and similar repositories for Mitochondria-Analyzer
Users that are interested in Mitochondria-Analyzer are comparing it to the libraries listed below
Sorting:
- Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.☆50Updated 4 years ago
- Analysis of smFISH data☆11Updated 7 years ago
- Histology Topography Cytometry Analysis Toolbox☆69Updated 3 weeks ago
- A scalable machine learning pipeline for probe specificity prediction.☆14Updated last year
- ☆29Updated last year
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆25Updated last week
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆39Updated last month
- Spatial analysis of FISH data☆33Updated 6 months ago
- Repository for storing prototype functionality implementations for the BKP☆36Updated last month
- A web tool to do automatic spots detections and positional adjustments for Spatial Transcriptomics Datasets.☆25Updated 3 years ago
- MERlin is an extensible analysis pipeline applied to decoding MERFISH data☆35Updated 4 years ago
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆16Updated 4 years ago
- Allen Brain Atlas utilities, parsers and data structures☆11Updated 8 years ago
- ☆23Updated 2 weeks ago
- Graph-based Decoding for In Situ Sequencing☆10Updated 5 years ago
- Image Mass Cytometry analysis pipeline☆26Updated 5 months ago
- Toolbox for the analysis of smFISH images.☆68Updated 2 years ago
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆65Updated 4 months ago
- ClusterMap for multi-scale clustering analysis of spatial gene expression☆46Updated 5 months ago
- Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation☆50Updated 3 years ago
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆102Updated this week
- An R package for performing cell typing in SMI and other single cell data☆43Updated 6 months ago
- A probabilistic cell typing algorithm for spatial transcriptomics.☆25Updated 2 weeks ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆50Updated 9 months ago
- Example vignette for dotdotdot software☆18Updated 4 years ago
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆84Updated this week
- Single cell RNA-seq analysis for transcriptomic type characterization☆37Updated 2 months ago
- Algorithmic and Utility Extensions for the Imaris Program☆19Updated 2 months ago
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆57Updated 4 months ago
- Spatial Single-Cell Analysis Toolkit☆103Updated 4 months ago