AhsenChaudhry / Mitochondria-AnalyzerLinks
Mitochondria Analyzer
☆22Updated 2 years ago
Alternatives and similar repositories for Mitochondria-Analyzer
Users that are interested in Mitochondria-Analyzer are comparing it to the libraries listed below
Sorting:
- Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.☆50Updated 4 years ago
- A scalable machine learning pipeline for probe specificity prediction.☆14Updated last year
- Image Mass Cytometry analysis pipeline☆27Updated 2 months ago
- Histology Topography Cytometry Analysis Toolbox☆67Updated last year
- Analysis of smFISH data☆11Updated 6 years ago
- Repository for storing prototype functionality implementations for the BKP☆31Updated last week
- Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation☆48Updated 3 years ago
- ClusterMap for multi-scale clustering analysis of spatial gene expression☆45Updated last month
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆38Updated 2 years ago
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆64Updated last month
- Spatial analysis of FISH data☆31Updated 2 months ago
- A simple flow cytometry analyzer GUI.☆9Updated last month
- Spatial Single-Cell Analysis Toolkit☆94Updated last month
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆20Updated 3 weeks ago
- ☆19Updated last month
- ☆29Updated last year
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆15Updated 3 years ago
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆81Updated 2 weeks ago
- Probabilistic cell segmentation for in situ spatial transcriptomics☆112Updated this week
- Python package for Probe set selection for targeted spatial transcriptomics.☆40Updated last month
- A probabilistic cell typing algorithm for spatial transcriptomics.☆24Updated last month
- Toolbox for the analysis of smFISH images.☆68Updated last year
- R package for visualization of highly multiplexed imaging data☆33Updated 2 months ago
- A web tool to do automatic spots detections and positional adjustments for Spatial Transcriptomics Datasets.☆24Updated 2 years ago
- Bring your single-cell data to life☆87Updated last week
- Python package for reading imaging mass cytometry (IMC) files☆15Updated this week
- astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨☆53Updated last month
- ☆15Updated 3 years ago
- MERlin is an extensible analysis pipeline applied to decoding MERFISH data☆35Updated 3 years ago
- Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information …☆36Updated last year