To explain clinical BERT model predictions, we present an approach which leverages integrated gradients to attribute events in medical records that lead to an outcome prediction.
☆11Jul 30, 2025Updated last year
Alternatives and similar repositories for Clinical-BERT-Explainability
Users that are interested in Clinical-BERT-Explainability are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- EMRFlow is designed to simplify the process of running PySpark jobs on Amazon EMR (Elastic Map Reduce).☆13Oct 2, 2024Updated last year
- This package helps wrangle the clinical data in IBD Plexus. IBD Plexus is a data exchange platform designed to accelerate research toward…☆22Jul 28, 2026Updated 3 weeks ago
- A Simple Github Action that adds docstrings to Python functions by analysing code using OpenAI's GPT3 API☆29May 7, 2023Updated 3 years ago
- The repository for the paper "Predicting in-hospital mortality by combining clinical notes with time-series data"☆12May 23, 2021Updated 5 years ago
- An app that pulls data from Yahoo's NBA fantasy league API to visualize and derive insights into players/teams☆10Nov 20, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Oct 22, 2021Updated 4 years ago
- ☆11Jul 31, 2020Updated 6 years ago
- Black for Python docstrings and reStructuredText (rst).☆18Apr 7, 2023Updated 3 years ago
- My solution to House-Prices Advanced Regression Techniques, A beginner-friendly project on Kaggle.☆12May 26, 2022Updated 4 years ago
- Parsing MHC nomenclature in the wild☆21Jul 22, 2026Updated 3 weeks ago
- A collection of useful GitHub tricks☆29Feb 21, 2026Updated 5 months ago
- Generator for docstrings☆19Feb 21, 2024Updated 2 years ago
- .Net wrapper around the LightGBM library☆17Dec 19, 2025Updated 7 months ago
- Python implementation of POPDx - Predictions for unseen, rare, and common labels.☆11Jun 26, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R package with HCUP Clinical Classification Software (CCS) mapping to common diagnosis and procedure codes☆17Mar 5, 2025Updated last year
- Grid Generation☆11Mar 7, 2024Updated 2 years ago
- Teaching Material: Template Illustrating Components of an R package for BCB410H - Applied Bioinformatics (2019-2025), University of Toron…☆67Dec 25, 2025Updated 7 months ago
- obesity challenge☆13May 12, 2018Updated 8 years ago
- python code for BRLTM model☆14Jan 17, 2021Updated 5 years ago
- Top open source software from the top 50 pharmaceutical companies☆77Jun 9, 2024Updated 2 years ago
- Pytorch implementation of Med2Vec.☆10Apr 26, 2024Updated 2 years ago
- Interactive & explainable GNN for drug repurposing☆14Mar 14, 2024Updated 2 years ago
- ☆11Jan 12, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Gravity project FHIR implementation guide covering social determinants of health, including data capture, recording SDOH issues and makin…☆19Updated this week
- ☆28Jul 6, 2026Updated last month
- EHR2Vec is a embedding translation tool for medical entities based on attention mechanism. We have provided a version of tensorflow imple…☆12Nov 14, 2020Updated 5 years ago
- ☆11Mar 28, 2024Updated 2 years ago
- ☆16Aug 28, 2020Updated 5 years ago
- Keyword Extraction and Analysis Pipeline & Application with KeyBERT and Taipy☆16Apr 18, 2023Updated 3 years ago
- ☆10Jul 13, 2026Updated last month
- ☆19Jul 7, 2025Updated last year
- Code for doing machine learning with various EHRs☆22Mar 1, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Code for "Classifying Unstructured Clinical Notes via Automatic Weak Supervision", MLHC 2022.☆16Mar 10, 2023Updated 3 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- ☆11May 25, 2026Updated 2 months ago
- Python implementation of several sequence alignment algorithms such as Waterman-Smith-Beyer, Gotoh, and Needleman-Wunsch intended to calc…☆22Jun 2, 2026Updated 2 months ago
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆14Feb 11, 2026Updated 6 months ago
- App for serotonergic targets☆12Jan 8, 2026Updated 7 months ago
- ☆12Jun 16, 2023Updated 3 years ago