fiji / cookbookLinks
Plugins collated for the Fiji Cookbook
☆25Updated 3 years ago
Alternatives and similar repositories for cookbook
Users that are interested in cookbook are comparing it to the libraries listed below
Sorting:
- ImageJ-specific applications of the SciJava script languages☆27Updated last week
 - TensorFlow-based classifier for microscope image focus quality.☆18Updated 3 years ago
 - Fiji library to perform image segmentation based on the Weka learning schemes☆119Updated last year
 - ImageJ2 programming examples☆192Updated 2 years ago
 - CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
 - Community-contributed and experimental CellProfiler modules.☆69Updated 2 weeks ago
 - QuickFigures is a toolset for creating scientific figures see publication for details☆35Updated last year
 - The ImageJ plugin to run deep-learning models☆98Updated this week
 - Modified version of MultiStackRegistration, for use from scripts.☆13Updated 3 years ago
 - Please go to https://github.com/CRBS/cdeep3m2 for most recent version☆59Updated 5 years ago
 - Microscopy Image Cytometry Toolkit☆114Updated 3 years ago
 - Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆153Updated 2 weeks ago
 - Collection of mathematical morphology methods and plugins for ImageJ☆110Updated last week
 - Open-source software for exploring and analyzing large, high-dimensional image-derived data.☆164Updated 3 months ago
 - This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 5 years ago
 - ImJoy: Deep Learning Made Easy!☆190Updated 2 years ago
 - Create 3D/4D animations using a natural language-based syntax☆60Updated 4 months ago
 - The python-microscopy environment - an open-source package for light microscopy☆93Updated last week
 - AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
 - A collection of tools for painting super-resolution images☆133Updated last week
 - Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 6 months ago
 - TensorFlow Deconvolution for Microscopy Data☆91Updated 3 years ago
 - OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological …☆214Updated last month
 - The Fluorescent Protein Database☆71Updated this week
 - Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 7 months ago
 - A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆44Updated last year
 - Fiji website☆37Updated this week
 - This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 8 years ago
 - Core functionality of NanoJ☆17Updated last year
 - Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated last month