PubMed Mapper: A Python library that map PubMed XML to Python object
☆45Mar 23, 2023Updated 3 years ago
Alternatives and similar repositories for pubmed-mapper
Users that are interested in pubmed-mapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- ☆12Jan 27, 2022Updated 4 years ago
- Nextflow pipeline to convert BAM to FASTQ, align, perform QC, assess targeted coverage, call gSNP, call sSNV, call mtSNV, call SVs, call …☆19Nov 24, 2025Updated 5 months ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆35Mar 9, 2026Updated last month
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- create word cloud using the abstract from PubMed☆22Feb 28, 2019Updated 7 years ago
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- single RNA-seq analysis of human keloid samples☆12May 25, 2021Updated 4 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- 研一深度学习课程作业 Bi-LSTM + Attention （nice code）☆10Jan 13, 2020Updated 6 years ago
- Batch download articles based on PMID (Pubmed ID)☆136Nov 8, 2023Updated 2 years ago
- Elevate your language models with insightful diversity metrics.☆11Feb 4, 2024Updated 2 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆88Oct 6, 2023Updated 2 years ago
- Sliding Window Inference for Network Generation☆10Feb 14, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆23Jun 7, 2024Updated last year
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Jun 10, 2024Updated last year
- Microbial agile accurate SNP Typer☆30Dec 27, 2023Updated 2 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- Python package for compositional data analysis☆14Dec 1, 2023Updated 2 years ago
- ☆12Sep 21, 2023Updated 2 years ago
- R codes and data for 'Smoking, Alcohol consumption, and 24 Gastrointestinal Diseases: Mendelian Randomization Analysis'☆11Mar 5, 2023Updated 3 years ago
- ☆10Dec 8, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆34Apr 4, 2025Updated last year
- ☆11Jul 8, 2024Updated last year
- ☆12Sep 12, 2021Updated 4 years ago
- Highly sensitive pathogen detection☆12Oct 5, 2020Updated 5 years ago
- An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro…☆18Apr 27, 2026Updated last week
- ☆16May 23, 2022Updated 3 years ago
- Primer design from single genes to whole gene families for unlocking the tree of life☆16Jun 4, 2025Updated 11 months ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Mar 24, 2021Updated 5 years ago
- Scripts, data files and ontologies for the FLOPO project☆11Sep 6, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A Novel Approach for Effective Multi-View Clustering with Information-Theoretic Perspective is a paper accepted by NeurIPS 2023☆10May 15, 2024Updated last year
- Non-redundant pangenome assemblies from multiple genomes or bins☆15May 13, 2025Updated 11 months ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆12Mar 21, 2019Updated 7 years ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated 2 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆22May 11, 2018Updated 7 years ago
- CNV analysis workflow code for the manuscript☆13Jun 22, 2020Updated 5 years ago
- free yourself from yinyangshi☆12Dec 13, 2016Updated 9 years ago