PubMed Mapper: A Python library that map PubMed XML to Python object
☆46Mar 23, 2023Updated 3 years ago
Alternatives and similar repositories for pubmed-mapper
Users that are interested in pubmed-mapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Jan 27, 2022Updated 4 years ago
- Nextflow pipeline to convert BAM to FASTQ, align, perform QC, assess targeted coverage, call gSNP, call sSNV, call mtSNV, call SVs, call …☆20Nov 24, 2025Updated 6 months ago
- python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.☆36Mar 9, 2026Updated 2 months ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated last year
- create word cloud using the abstract from PubMed☆22Feb 28, 2019Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- Python library for work with BioCreative files☆13Mar 28, 2018Updated 8 years ago
- single RNA-seq analysis of human keloid samples☆12May 25, 2021Updated 5 years ago
- OTSeq2Set, XMTC☆11Dec 31, 2022Updated 3 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Jan 21, 2022Updated 4 years ago
- Batch download articles based on PMID (Pubmed ID)☆137Nov 8, 2023Updated 2 years ago
- Elevate your language models with insightful diversity metrics.☆11Feb 4, 2024Updated 2 years ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated 2 years ago
- ☆24Nov 30, 2020Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Dec 16, 2016Updated 9 years ago
- Code for AttentionMeSH☆17Oct 5, 2018Updated 7 years ago
- Sliding Window Inference for Network Generation☆10Feb 14, 2018Updated 8 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆11Nov 7, 2024Updated last year
- Microbial agile accurate SNP Typer☆30Dec 27, 2023Updated 2 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- ☆13Jun 6, 2024Updated last year
- ☆12Sep 21, 2023Updated 2 years ago
- R codes and data for 'Smoking, Alcohol consumption, and 24 Gastrointestinal Diseases: Mendelian Randomization Analysis'☆11Mar 5, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Dec 8, 2021Updated 4 years ago
- 研一深度学习课程作业 Bi-LSTM + Attention （nice code）☆11Jan 13, 2020Updated 6 years ago
- Scripts and data files used to generate the figures of the Crohn's single-cell RNA-seq paper "Single-cell analysis of Crohn’s disease les…☆19Aug 29, 2019Updated 6 years ago
- ☆24Mar 1, 2023Updated 3 years ago
- ☆19Jun 4, 2021Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆35Apr 4, 2025Updated last year
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 8 years ago
- ☆11Jul 8, 2024Updated last year
- ☆12Sep 12, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Highly sensitive pathogen detection☆12Oct 5, 2020Updated 5 years ago
- A dual-chatbot system for learning languages based on LangChain☆13Jun 25, 2023Updated 2 years ago
- An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro…☆18May 6, 2026Updated 3 weeks ago
- PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…☆27Sep 22, 2018Updated 7 years ago
- ☆16May 23, 2022Updated 4 years ago
- Primer design from single genes to whole gene families for unlocking the tree of life☆16May 14, 2026Updated 2 weeks ago
- Scripts, data files and ontologies for the FLOPO project☆11Sep 6, 2019Updated 6 years ago