seasky002002 / StrandscriptLinks
☆13Updated 4 years ago
Alternatives and similar repositories for Strandscript
Users that are interested in Strandscript are comparing it to the libraries listed below
Sorting:
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 8 months ago
- ☆72Updated 2 years ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- R package containing useful functions for mutational signature analysis☆86Updated this week
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆48Updated 2 years ago
- ☆21Updated last month
- ☆31Updated last year
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 6 months ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 10 months ago
- ☆39Updated 5 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- ☆50Updated 4 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated last month
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated last month
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 3 weeks ago
- An R package for inferring the subclonal architecture of tumors☆122Updated 2 years ago