ropensci / onekpLinks
Access sequences from the 1000 Plant Initiative (1KP)
☆13Updated 2 years ago
Alternatives and similar repositories for onekp
Users that are interested in onekp are comparing it to the libraries listed below
Sorting:
- babette is an R package to work with BEAST2☆46Updated last month
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 11 months ago
- population genetic simulations with R and Shiny☆28Updated 8 months ago
- R Interfaces to Phylogenetic Software☆12Updated 5 months ago
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/☆12Updated last year
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated last year
- An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data☆19Updated last year
- Phylogenetic ANalyses of DiversificAtion☆24Updated 6 months ago
- R package: Evolutionary biology in R☆17Updated last year
- the hierfstat package☆25Updated 7 months ago
- initial commit☆26Updated 2 years ago
- Using ggtree to Visualize Data on Tree-Like Structure☆24Updated 5 years ago
- A textbook for phylogenetic comparative methods.☆44Updated 5 years ago
- Exploring the Phylogenetic Signal in Continuous Traits☆18Updated last month
- R package for simulating fossil data on phylogenetic trees under mechanistic models of preservation and sampling☆11Updated last month
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…☆25Updated 4 years ago
- A Landscape Genomic Analysis Toolkit in R☆20Updated last week
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated 3 weeks ago
- R We There Yet?☆31Updated 3 months ago
- ☆37Updated 8 months ago
- ☆20Updated last year
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated 2 months ago
- Software for the Analysis of Phylogenetic Community Structure and Character Evolution, with Phylomatic☆42Updated 2 years ago
- Course repository for Methods in Biodiversity Analysis☆22Updated last month
- Species richness with high diversity☆68Updated 3 months ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Updated 3 weeks ago
- An R package for manipulating phylogentic trees☆11Updated 4 years ago
- Informatic Sequence Classification Trees☆14Updated last month