Alternatives and similar repositories for onekp:

Users that are interested in onekp are comparing it to the libraries listed below

• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated last year
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆23Updated 9 months ago
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆19Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆45Updated this week
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• danlwarren / RWTY
  R We There Yet?
  ☆30Updated 3 weeks ago
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated 2 months ago
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆29Updated last month
• alexkychen / assignPOP
  Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…
  ☆16Updated last year
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆33Updated 7 years ago
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated 5 months ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated 3 months ago
• leffj / mctoolsr
  Microbial community analysis tools in R
  ☆21Updated 2 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• cjbattey / driftR
  population genetic simulations with R and Shiny
  ☆27Updated 5 months ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆16Updated last year
• coleoguy / evobir
  R package: Evolutionary biology in R
  ☆16Updated 11 months ago
• gmbecker / genbankr
  ☆19Updated last year
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆25Updated 2 weeks ago
• jgx65 / hierfstat
  the hierfstat package
  ☆24Updated 4 months ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated 9 months ago
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆24Updated last year
• kkeenan02 / diveRsity
  diveRsity: A comprehensive, general purpose population genetics analysis package.
  ☆23Updated 7 years ago
• mrborges23 / delta_statistic
  Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…
  ☆25Updated 3 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆40Updated 6 months ago
• lmcai / PhyloHerb
  PHYLOgenomic analysis pipeline for HERBarium specimens
  ☆17Updated last year
• TheWangLab / algatr
  A Landscape Genomic Analysis Toolkit in R
  ☆18Updated last month
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆56Updated 8 months ago
• thednainus / Bayesian_tutorial
  Tutorial on Bayesian phylogenetic analysis
  ☆46Updated 7 years ago