rezacsedu / OncoNetExplainer
OncoNetExplainer: Explainable Prediction of Cancer Types Based on Gene Expression Data
☆10Updated 2 years ago
Alternatives and similar repositories for OncoNetExplainer:
Users that are interested in OncoNetExplainer are comparing it to the libraries listed below
- This is the repository for paper titled as "Convolutional neural network models for cancer type prediction based on gene expression".☆50Updated 5 years ago
- Pathway-based sparse deep neural network for survival analysis☆38Updated last year
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 4 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆68Updated 5 months ago
- ☆14Updated last year
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆87Updated 6 years ago
- HiGCN: a hierarchical graph convolution network for representation learning of gene expression data☆11Updated 4 years ago
- TCGA BLCA tmb prediction by Hongming Xu☆13Updated 4 years ago
- Deep Learning Based Tumor Type Classification Using Gene Expression Data☆22Updated 6 months ago
- Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer☆18Updated 4 years ago
- ☆27Updated 4 years ago
- Data and code to accompany our Nature publication☆45Updated 2 years ago
- Scripts for data processing☆43Updated 9 months ago
- A Snapshot Neural Ensemble Method for Cancer Type Prediction Based on Copy Number Variations☆20Updated 2 years ago
- 🫀 Code for "Neural network-based integration of polygenic and clinical information: Development and validation of a prediction model for…☆12Updated 3 years ago
- ☆11Updated 5 years ago
- ☆19Updated 4 years ago
- Multimodal deep learning model for long-term cancer survival prediction☆79Updated 3 years ago
- Interpretable convolutional neural networks on multi-omics data predict long-term survival in glioblastoma☆15Updated last year
- ☆47Updated 7 years ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆16Updated 4 years ago
- ☆42Updated 3 months ago
- Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.☆18Updated 6 years ago
- A set of codes to classify H&E slides using deep learning☆30Updated 3 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆75Updated 4 years ago
- Repository for transferGWAS, a deep learning method for performing genome-wide association studies on full medical imaging data.☆13Updated 2 years ago
- Repo for Tang et al, bioRxiv 454793 (2018)☆41Updated 6 years ago
- Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels☆30Updated 4 years ago
- ☆34Updated 3 years ago
- HCC_Deep_learning☆19Updated 4 years ago