qiime2 / q2-typesLinks
☆17Updated 2 weeks ago
Alternatives and similar repositories for q2-types
Users that are interested in q2-types are comparing it to the libraries listed below
Sorting:
- A Qiime plugin for MICOM.☆10Updated last month
- Sample search by metadata and features☆47Updated 2 years ago
- Python package to study microbial communities using metabolic modeling.☆115Updated 2 weeks ago
- An imagemagick-like frontend to Biopython SeqIO☆117Updated last year
- Bioinformatics Tools☆90Updated this week
- The Biological Observation Matrix (BIOM) Format Project☆97Updated last month
- an interactive viewer for populations of bacterial genomes linked by a phylogeny☆131Updated last year
- Sparse Cooccurence Network Investigation for Compositional data☆25Updated last week
- Antibiotic resistance prediction in minutes☆114Updated last year
- A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.☆83Updated 6 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 3 years ago
- ☆21Updated 9 months ago
- Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files☆129Updated 4 years ago
- Download files from NCBI Entrez by accession☆134Updated last year
- A set of tools to analyse the output from TraDIS analyses☆24Updated 2 years ago
- A robust, extensible metagenomics pipeline☆174Updated this week
- A tool for agile functional analysis of shotgun metagenomic data☆24Updated last year
- motus - a tool for marker gene-based OTU (mOTU) profiling☆168Updated 2 months ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Updated 7 years ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆25Updated 11 months ago
- Woltka: a versatile meta'omic data classifier☆76Updated 5 months ago
- MGnify genome analysis pipeline☆108Updated last month
- A fast and scalable phylogenetic tree viewer for microbiome data analysis☆55Updated last year
- ☆76Updated 5 years ago
- Meta-Omics Software for Community Analysis☆37Updated last year
- SINA - Reference based multiple sequence alignment☆41Updated 5 years ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 8 months ago
- Protein Alignment and Detection Interface☆60Updated last year
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 3 years ago
- genome_updater is a bash script that downloads and updates (non-redundant) snapshots of the NCBI Genomes repository (RefSeq/GenBank) with…☆164Updated 2 months ago