MIT-BECL / awesome-becl-resourcesLinks
Awesome resources for biological engineering students compiled by the MIT Communication Lab
☆22Updated 6 years ago
Alternatives and similar repositories for awesome-becl-resources
Users that are interested in awesome-becl-resources are comparing it to the libraries listed below
Sorting:
- For analysis of microbiome and microbial community data☆48Updated last year
- A modern genomics framework for julia☆70Updated 5 years ago
- Parse and process SAM and BAM formatted files☆30Updated 4 months ago
- Online material for the Perspective: "Julia for Biologists" presented at JuliaCon 2021: https://www.youtube.com/watch?v=gRj7E5kYG1I☆100Updated 2 years ago
- A tutorial on how to set up a Linux environment on a computer running Windows 10. Followed by how to install and use (bio)conda.☆43Updated last year
- extract gene TSS site form gencode/ensembl/gencode database GTF file and export bed format file.☆11Updated 3 years ago
- A repo hosting the combined lectures of a course on Fundamentals of Computational Biology☆14Updated 2 years ago
- Nextflow pipeline for hyperparameter optimization of machine learning models☆24Updated last year
- piano - An R/Bioconductor package for gene set analysis☆13Updated 2 years ago
- Computation of Microbial Ecosystems in Time and Space☆25Updated last month
- ☆24Updated last year
- Auto-analysis for Real-Time PCR (qPCR) data☆39Updated 2 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- ☆12Updated last year
- A collection of bioinformatics file format specimens to test against☆47Updated 5 years ago
- ☆24Updated 4 years ago
- Codon's bioinformatics module☆54Updated last month
- Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python☆18Updated 8 years ago
- R Data Exploration for Serratus☆15Updated 2 years ago
- GitHub for the SIB courses NGS - Genome variant analysis☆25Updated 8 months ago
- Biological file format specimens for testing packages, and functions to assist in testing.☆14Updated last year
- Small variant calling for haploid samples☆41Updated last week
- 🧬High-performance genetics- and genomics-related data visualization using Makie.jl☆87Updated 5 months ago
- Lecture notes/book in progress on computing for conservation genomics☆38Updated last year
- R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.☆22Updated 6 years ago
- 🧬 Efficient parallelized peta-scale protein database search☆41Updated last year
- Inference of microbial interaction networks from large-scale heterogeneous abundance data☆87Updated last year
- Code depository for papers☆25Updated 8 months ago
- open source bagel recipe; let's raise the quality of bagels worldwide☆28Updated 10 months ago
- REference Sequence annotation and CuRatIon Pipeline☆98Updated last week