An annotation and instance segmentation-based multi-object tracking and behavior analysis package.
☆56Mar 7, 2026Updated this week
Alternatives and similar repositories for annolid
Users that are interested in annolid are comparing it to the libraries listed below
Sorting:
- Anatomical space conventions made easy.☆12Mar 3, 2026Updated last week
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- An R toolbox for analysing movement across space and time☆10Jan 16, 2026Updated last month
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆13Mar 2, 2026Updated last week
- Build unbiased anatomical templates from individual images☆12Mar 3, 2026Updated last week
- Behavior Classifier Component from the Jax Animal Behavior System☆20Updated this week
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated 2 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆29Mar 3, 2026Updated last week
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆28Updated this week
- Read and write files from the BrainGlobe neuroanatomy suite☆15Mar 3, 2026Updated last week
- Deep learning for animal action recognition toolbox☆35Sep 18, 2025Updated 5 months ago
- Standalone utilities for SLEAP pose tracking data.☆21Updated this week
- ☆10Mar 15, 2023Updated 2 years ago
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- NIU website on common software problems and their troubleshooting☆10Feb 13, 2026Updated 3 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated 11 months ago
- Brain flatmaps generation☆11Oct 5, 2022Updated 3 years ago
- LISBET Is a Social BEhavior Transformer (LISBET)☆12Feb 10, 2026Updated last month
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆25Mar 3, 2026Updated last week
- Combining OSTrack and Segment Anything for VOT and VOS☆14Apr 10, 2023Updated 2 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- ☆11Oct 21, 2025Updated 4 months ago
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated 10 months ago
- Behavioral analysis via self-supervised pretraining of transformers☆24Feb 27, 2026Updated last week
- Re-usable GitHub Action scripts☆14Mar 2, 2026Updated last week
- ☆29Oct 22, 2025Updated 4 months ago
- NWB extension to store pose estimation data☆17Feb 27, 2026Updated last week
- Fancier logging with python.☆16Mar 2, 2026Updated last week
- Napari plugin for working with video files.☆13Aug 20, 2025Updated 6 months ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆21Dec 16, 2025Updated 2 months ago
- Deep Audio Segmenter☆33Oct 21, 2025Updated 4 months ago
- ☆18Feb 10, 2022Updated 4 years ago
- Segmentation of anatomical structures in a common coordinate space☆36Mar 3, 2026Updated last week
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Apr 24, 2023Updated 2 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- This repository contains projects of Escort and Estag☆26Mar 27, 2025Updated 11 months ago