freesurfer / samseg
Sequence Adaptive Multimodal SEGmentation (SAMSEG)
☆11Updated 2 weeks ago
Alternatives and similar repositories for samseg:
Users that are interested in samseg are comparing it to the libraries listed below
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- Preprocessing of arterial spin labeling (ASL) data☆48Updated this week
- Computational Anatomy Toolbox for SPM12 or SPM25☆35Updated this week
- Scripts to prepare MP2RAGE for Freesurfer☆27Updated last year
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆69Updated 9 months ago
- Bash script to compute DTI-ALPS☆49Updated 2 months ago
- PET Unified Pipeline☆22Updated 4 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated last week
- The TemplateFlow Archive - A DataLad super-dataset☆76Updated last year
- Segmentation tool for the delineation and volumetric quantification of the choroid plexus☆15Updated 3 weeks ago
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆12Updated 3 weeks ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated 10 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆24Updated last year
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆38Updated 2 years ago
- Procedure to create monkey brain surfaces and project results to it☆11Updated 2 months ago
- Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.☆30Updated 10 months ago
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆13Updated last year
- ☆36Updated 3 years ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆23Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 4 months ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆16Updated 11 months ago
- Preprocessing of diffusion MRI☆153Updated 2 weeks ago
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆31Updated last year
- SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts☆10Updated last year
- A repository for the Quantitative Imaging Toolkit (QIT)☆23Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆69Updated this week
- Purifibre removes spurious streamlines from tractograms☆10Updated 3 years ago
- ☆11Updated 2 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- BIDS app wrapping recon-all from FreeSurfer☆41Updated 5 months ago