CatalystCode / corpus-to-graph-mlLinks
This repository contains machine learning related work for the corpus to graph project, including Jupyter research notebooks and a Flask webservice to host the model
☆46Updated 9 years ago
Alternatives and similar repositories for corpus-to-graph-ml
Users that are interested in corpus-to-graph-ml are comparing it to the libraries listed below
Sorting:
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆54Updated 8 years ago
- Getting started with AllenNLP and PyTorch by training a tweet classifier☆66Updated 8 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- NLP pipeline using word2vec (preprocessing/embedding/prediction/clustering)☆116Updated last year
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago
- LexNET: Integrated Path-based and Distributional Method for Lexical Semantic Relation Classification☆62Updated 7 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Python library for Natural Language Preprocessing (NLPre)☆191Updated 2 years ago
- Clinical NLP Analysis with Elasticsearch and Kibana☆35Updated 6 years ago
- Easy-to-use text representations extraction library based on the Transformers library.☆32Updated 3 years ago
- BioBert Pytorch☆116Updated 2 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Extracting scientific claims from biomedical abstracts (powered by AllenNLP)☆144Updated 4 years ago
- Inter-annotator agreement for Doccano☆28Updated 5 years ago
- Template for AC297r projects☆33Updated 5 years ago
- ☆15Updated 5 years ago
- Miscellaneous tools for clinical ML☆29Updated 8 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Automatically labeling training data☆107Updated 6 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- A embed able annotation tool for end to end cross document co-reference☆42Updated 2 years ago
- A way to do annotations for NER. TALEN: Tool for Annotation of Low-resource ENtities☆118Updated 4 months ago
- Example using Polyaxon to experiment with pre-training spaCy☆65Updated 4 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Updated 2 years ago
- An ontology matcher for matching entities between knowledgebases☆71Updated 3 years ago
- Clinical spelling correction with word and character n-gram embeddings.☆75Updated 3 years ago
- OAQA Biomedical Question Answering (BioASQ) System☆37Updated 8 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- Transfer Learning for NLP Tasks☆55Updated 7 years ago