CatalystCode / corpus-to-graph-ml
This repository contains machine learning related work for the corpus to graph project, including Jupyter research notebooks and a Flask webservice to host the model
☆46Updated 8 years ago
Alternatives and similar repositories for corpus-to-graph-ml:
Users that are interested in corpus-to-graph-ml are comparing it to the libraries listed below
- Getting started with AllenNLP and PyTorch by training a tweet classifier☆66Updated 7 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 5 years ago
- Example using Polyaxon to experiment with pre-training spaCy☆65Updated 3 years ago
- NLM .nxml to text format conversion☆24Updated 9 years ago
- Crowdsourced ground truth for medical relation extraction.☆68Updated 5 years ago
- This is an implementation of Hearst patterns, for finding hyponyms, written in Python.☆88Updated 2 years ago
- Clinical spelling correction with word and character n-gram embeddings.☆74Updated 2 years ago
- TETRE: a Toolkit for Exploring Text for Relation Extraction☆75Updated 7 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 4 years ago
- OAQA Biomedical Question Answering (BioASQ) System☆38Updated 7 years ago
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆55Updated 7 years ago
- A embed able annotation tool for end to end cross document co-reference☆41Updated last year
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆21Updated 4 years ago
- Python code for reading Brat Repositories. Supports saving and reading from XML files for easy acces to annotations.☆41Updated 5 years ago
- Code and data for ACL2016 article "Which argument is more convincing? Analyzing and predicting convincingness of Web arguments using bidi…☆28Updated 8 years ago
- Event extraction pipeline.☆34Updated 7 years ago
- A way to do annotations for NER. TALEN: Tool for Annotation of Low-resource ENtities☆112Updated 2 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- Inter-annotator agreement for Doccano☆27Updated 4 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 4 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 8 years ago
- spaCy pipeline component for generating spaCy KnowledgeBase Alias Candidates for Entity Linking☆86Updated 2 years ago
- Experiments with Zalando's flair library☆34Updated last year
- Regex like pattern tree matching but on sentence's tree instead of Strings☆42Updated 6 years ago
- CrowdTruth framework for crowdsourcing ground truth for training & evaluation of AI systems☆57Updated 9 months ago
- Visualize word embeddings of a vocabulary in TensorBoard, including the neighbors☆46Updated 7 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- A previous version of Snorkel focused on information extraction☆34Updated 5 years ago
- Template for AC297r projects☆33Updated 5 years ago