2024-2025 papers in computational pathology, primarily from Nature, Cell, Science, and top-tier conferences. Covers AI foundation models, multimodal generative AI, virtual staining, survey, and etc....
☆18Aug 4, 2026Updated last week
Alternatives and similar repositories for Awesome-Computational-Pathology-Papers
Users that are interested in Awesome-Computational-Pathology-Papers are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [NeurIPS 2025] Revisiting End-to-End Learning with Slide-level Supervision in Computational Pathology☆35Oct 20, 2025Updated 9 months ago
- Codes for the paper "Super-resolved Virtual Staining of Label-free Tissue Using Diffusion Models"☆30Apr 15, 2025Updated last year
- Official implementation of DiffMix (MICCAI 2023)☆17Jul 28, 2026Updated 2 weeks ago
- ☆18Jun 16, 2026Updated last month
- Awesome List of Digital and Computational Pathology Resources☆130Feb 11, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models☆57Apr 7, 2026Updated 4 months ago
- [ICCV 2023 Oral, IJCV 2025] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification☆97Jan 7, 2026Updated 7 months ago
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 4 months ago
- [MICCAI 2024]Official implementation of "Pathological Semantics-Preserving Learning for H&E-to-IHC Virtual Staining"☆42Apr 22, 2026Updated 3 months ago
- Repository for "Prompt-MIL: Boosting Multi-Instance Learning Schemes via Task-specific Prompt Tuning" (MICCAI2023)☆19Oct 23, 2023Updated 2 years ago
- Implementation of paper "Advancing H&E-to-IHC Virtual Staining with Task-Specific Domain Knowledge for HER2 Scoring" accepted by MICCAI 2…☆27Jul 4, 2024Updated 2 years ago
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆36Aug 11, 2025Updated 11 months ago
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆25Updated this week
- Source code related to the research paper entitled RVENet: A Large Echocardiographic Dataset for the Deep Learning-Based Assessment of Ri…☆12Mar 10, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" …☆10Oct 17, 2024Updated last year
- 软院研究生经验分享☆68Sep 20, 2024Updated last year
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- ☆13May 28, 2025Updated last year
- An Enhanced CLIP Framework for Learning with Synthetic Captions☆40Apr 18, 2025Updated last year
- ☆15Jan 14, 2026Updated 6 months ago
- ☆13Apr 18, 2023Updated 3 years ago
- [AAAI'26] Official implementation of CMMCoT: Enhancing Complex Multi-Image Comprehension via Multi-Modal Chain-of-Thought and Memory Augm…☆11Dec 5, 2025Updated 8 months ago
- [Official Repo: MICCAI 2022] LSSANet: A Long Short Slice-Aware Network for Pulmonary Nodule Detection☆13Nov 14, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code related to the PANDA challenge on artificial intelligence for Gleason grading☆20Oct 22, 2021Updated 4 years ago
- Full code for the paper "Incorporating Task-Specific Structural Knowledge into CNNs for Brain Midline Shift Detection"☆13Aug 19, 2019Updated 6 years ago
- Toolkit for large-scale whole-slide image processing.☆616Updated this week
- A generative foundation model for digital histopathology images☆35Apr 7, 2026Updated 4 months ago
- CUMT 计算机科学与技术 2016版培养方案 课程资源☆10Sep 7, 2022Updated 3 years ago
- ☆10Apr 16, 2024Updated 2 years ago
- Anatomy-aware Spatial Imputation Graphic Network for 3D Spatial Transcriptomics☆24Jun 28, 2025Updated last year
- SparAlloc: A Simple and Modular Framework for Decoupled Sparsity Allocation in Layerwise Pruning for LLM☆16Jun 5, 2025Updated last year
- [Accepted by TNNLS] Source Code for Relational Redundancy-Free Graph Clustering☆13Sep 24, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- SlideChat: A Large Vision-Language Assistant for Whole-Slide Pathology Image Understanding☆126Apr 2, 2026Updated 4 months ago
- Parse2022, IIT Madras| Accepted ISBI 2023☆15Jul 2, 2025Updated last year
- Interpretable Vision-Language Survival Analysis with Ordinal Inductive Bias for Computational Pathology (ICLR 2025)☆72May 5, 2025Updated last year
- Code for the benchmarking single-cell foundation models (scGPT, scBERT, and Geneformer) for cell-type annotation task using skewed single…☆16Dec 8, 2024Updated last year
- single-cell RNA-seq Clustering via Deep Cut-informed Graph☆15Nov 23, 2025Updated 8 months ago
- Reworked clustering metrics for assessing performance in imbalanced settings☆18Jun 3, 2024Updated 2 years ago