PathologyDataScience / MuTILs_Panoptic

Related projects ⓘ

Alternatives and complementary repositories for MuTILs_Panoptic

• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆18Updated 7 months ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆35Updated last year
• huangzhii / IMPRESS
  ☆12Updated last year
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆31Updated last year
• wangxiaodong1021 / HCC_Prognostic
  Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning
  ☆41Updated 3 years ago
• ShahiraAbousamra / til_classification
  ☆14Updated last year
• sdw95927 / Ceograph
  CEll spatial Organization-based graph convolutional network
  ☆20Updated 9 months ago
• AIRMEC / HECTOR
  Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.
  ☆32Updated 5 months ago
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆25Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated 10 months ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆50Updated 3 years ago
• pjl54 / WSI_handling
  Class for getting ROIs and masks from annotated pyramidal images. A work in progress.
  ☆12Updated 3 years ago
• wenqi006 / SlideGraph
  ☆49Updated 2 years ago
• AIRMEC / im4MEC
  Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…
  ☆35Updated 9 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆46Updated 2 years ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆29Updated last month
• msk-mind / luna
  Scripts for data processing
  ☆41Updated 5 months ago
• trislaz / wsi_mil
  ☆19Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆47Updated 2 months ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆49Updated 2 weeks ago
• fuscc-deep-path / sc_MTOP
  sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…
  ☆27Updated this week
• qinghezeng / Histo2GeneSignatures
  Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images
  ☆20Updated 4 months ago
• CielAl / torch-staintools
  Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms
  ☆23Updated 9 months ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆86Updated last week
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆64Updated 9 months ago
• gerstung-lab / PC-CHiP
  Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
  ☆74Updated 3 years ago
• Paige-AI / paige-ml-sdk
  This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…
  ☆29Updated 3 months ago
• DIAGNijmegen / pathology-hooknet-tls
  ☆12Updated 2 months ago
• impromptuRong / hd_wsi
  ☆23Updated 2 weeks ago
• jnkather / DeepHistology
  A pan-cancer platform for mutation prediction from routine histology
  ☆67Updated 3 years ago