Alternatives and similar repositories for heididown

Users that are interested in heididown are comparing it to the libraries listed below

• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆67Updated 3 weeks ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆80Updated this week
• const-ae / glmGamPoi
  Fit Gamma-Poisson Generalized Linear Models Reliably
  ☆115Updated 4 months ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated last year
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆173Updated 3 weeks ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆166Updated 2 weeks ago
• lazappi / clustree
  Visualise Clusterings at Different Resolutions
  ☆234Updated last month
• kevinrue / velociraptor
  Toolkit for Single-Cell Velocity
  ☆58Updated 2 weeks ago
• tidyomics / tidySingleCellExperiment
  Brings SingleCellExperiment objects to the tidyverse
  ☆36Updated 2 weeks ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆64Updated last month
• JinmiaoChenLab / cytofkit
  cytofkit: an integrated flow/mass cytometry data analysis pipeline
  ☆58Updated 4 years ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆78Updated 2 months ago
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆46Updated 4 years ago
• gdagstn / borges
  Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data
  ☆18Updated last month
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆37Updated 2 years ago
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆191Updated last week
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆59Updated 3 weeks ago
• HelenaLC / CATALYST
  Cytometry dATa anALYsis Tools
  ☆69Updated last week
• markrobinsonuzh / cytofWorkflow
  ☆16Updated last year
• RGLab / openCyto
  A package that provides data analysis pipeline for flow cytometry.
  ☆79Updated 3 months ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆140Updated 3 months ago
• DavisLaboratory / msImpute
  Methods for label-free mass spectrometry proteomics
  ☆15Updated 4 months ago
• MangiolaLaboratory / sccomp
  Mixed-effect model to test differences in cell type proportions from single-cell data, in R
  ☆107Updated this week
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆106Updated last year
• csoneson / conquer_comparison
  Code for evaluation of differential expression methods in single-cell RNA-seq data
  ☆112Updated 4 years ago
• wjawaid / enrichR
  An R interface to enrichR
  ☆91Updated 5 months ago
• jokergoo / InteractiveComplexHeatmap
  Make Interactive Complex Heatmaps
  ☆136Updated last year
• satijalab / seurat-object
  ☆28Updated this week
• SaskiaFreytag / schex
  ☆74Updated last year
• iSEE / iSEE
  R/shiny interface for interactive visualization of data in SummarizedExperiment objects
  ☆228Updated 2 weeks ago