Alternatives and similar repositories for MRIcroS

Users that are interested in MRIcroS are comparing it to the libraries listed below

• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• rordenlab / spmScripts
  Handy scripts for SPM
  ☆77Updated 5 years ago
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆80Updated this week
• bids-standard / bids-matlab
  MATLAB / Octave tools for BIDS datasets
  ☆57Updated last week
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆104Updated last week
• miykael / fmriflows
  fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…
  ☆71Updated 3 years ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆53Updated last week
• automaticanalysis / automaticanalysis
  Automatic Analysis (aa)
  ☆74Updated last year
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆52Updated 3 weeks ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆87Updated this week
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆36Updated 11 months ago
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 8 months ago
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆250Updated last week
• dutchconnectomelab / Simple-Brain-Plot
  brainPlot is a MATLAB function to create simple line-art brain plots.
  ☆104Updated 4 years ago
• jms290 / NMT
  NIMH Macaque Template
  ☆19Updated 4 years ago
• iELVis / iELVis
  Open-source software for intracranial electrode localization and visualization
  ☆34Updated 5 months ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆69Updated 7 months ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated last month
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆111Updated this week
• trendscenter / gift
  Group ICA/IVA software (MATLAB)
  ☆92Updated last week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 8 months ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆61Updated 7 months ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆29Updated 5 months ago
• yetianmed / subcortex
  ☆136Updated 4 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated this week
• spm / spm12
  Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version
  ☆156Updated last year