Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
☆53May 1, 2026Updated last week
Alternatives and similar repositories for minc-toolkit-v2
Users that are interested in minc-toolkit-v2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- libminc is the core library and API of the MINC toolkit☆19Apr 27, 2026Updated last week
- Basic minc-tools from former minc repository☆34Apr 23, 2026Updated 2 weeks ago
- Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and …☆25Updated this week
- CIVET Installer☆31Jan 29, 2022Updated 4 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆33Jul 27, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆18May 22, 2024Updated last year
- An ansible playbook to deploy a complete standalone neuroimaging workstation☆27Mar 27, 2026Updated last month
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Jun 18, 2024Updated last year
- OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…☆36Nov 2, 2016Updated 9 years ago
- Documentation for every thing, everything documented☆43Jan 15, 2026Updated 3 months ago
- macOS Xcode GLSL Volume Render for NIfTI, Bio-Rad Pic, NRRD, Philips, ITK MetaImage, AFNI, Freesurfer, DICOM images.☆30Jun 18, 2025Updated 10 months ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆76Dec 27, 2025Updated 4 months ago
- Jupyter Notebook that illustrates how to query, package, and download data from NIMH Data Archive☆33Mar 31, 2021Updated 5 years ago
- Advanced Normalization Tools (ANTs)☆1,459May 2, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines☆13Nov 12, 2025Updated 5 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Mar 17, 2021Updated 5 years ago
- Progression Models for Repeated Measures☆12Feb 19, 2026Updated 2 months ago
- Metaproject uniting all the available minc tools☆40Aug 9, 2023Updated 2 years ago
- Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)☆38Apr 4, 2026Updated last month
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆196Mar 6, 2026Updated 2 months ago
- Deep Learning tools for medical image and biomarker analysis☆19Jan 11, 2023Updated 3 years ago
- A variational Bayesian method for similarity learning in non-rigid image registration (CVPR 2022)☆20May 21, 2022Updated 3 years ago
- GNU Octave library for connectivity analysis in large fMRI datasets☆30Oct 11, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Apr 26, 2026Updated 2 weeks ago
- A set of tools for processing Quantitative MR Images☆63Apr 15, 2026Updated 3 weeks ago
- PCA Model for Brain Extraction☆18Jan 2, 2019Updated 7 years ago
- MATLAB program for viewing 3D fMRI statistical images☆53Oct 29, 2021Updated 4 years ago
- SimpleITK tutorial at the 2015 MICCAI conference☆24Oct 14, 2015Updated 10 years ago
- Neuroimaging analysis and visualization suite☆828Updated this week
- Trained TensorFlow models for 3D image processing☆28Jan 31, 2024Updated 2 years ago
- Preprocessing of functional and structural MRI data into standardized MNI space using SPM12 and DARTEL.☆15Oct 10, 2017Updated 8 years ago
- MATLAB code for reading and writing CIFTI connectivity files☆70Feb 25, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A framework for developing neural network models for 3D image processing.☆166Apr 14, 2026Updated 3 weeks ago
- NeuroData's MRI to Graphs (m2g) - connectome estimation package and pipeline☆65Mar 1, 2026Updated 2 months ago
- nii_preprocess adapted for LARC and ABC studies at UofSC☆23Feb 16, 2022Updated 4 years ago
- Script for downloading S3 links from Amazon Web Service☆12Apr 24, 2019Updated 7 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆350Updated this week
- Load fMRIprep confounds in python☆38Jan 30, 2022Updated 4 years ago
- A General Rodent MRI Skull-Stripping Tool Based on Multi-Center Data☆11Dec 7, 2024Updated last year