stewid / SimInfLinks
A framework for data-driven stochastic disease spread simulations
☆36Updated last month
Alternatives and similar repositories for SimInf
Users that are interested in SimInf are comparing it to the libraries listed below
Sorting:
- R Package for individual based epidemiological models☆32Updated 4 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- R package for easier interactions with the Go.Data API☆13Updated 2 years ago
- SEIR+ model☆19Updated 5 months ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated 2 years ago
- miscellaneous talks and small projects☆11Updated last month
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆55Updated last year
- ☆33Updated 10 months ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Uses Stan sampler and math library to semiparametrically fit linear and multilevel models with additive Bayesian Additive Regression Tree…☆47Updated 3 weeks ago
- ☆43Updated 4 months ago
- R package for deriving social mixing matrices from survey data.☆42Updated last week
- epidemia package☆49Updated 3 years ago
- Bayesian SEIR model to estimate the effects of social-distancing on COVID-19☆27Updated 4 years ago
- Course on nowcasting and forecasting of infectious disease dynamics☆22Updated 2 weeks ago
- Utilities for Scoring and Assessing Predictions☆60Updated 2 weeks ago
- Analysing epidemic trends using AutoML approaches.☆19Updated 4 years ago
- R package for "Epidemics: Models and data using R"☆55Updated 3 years ago
- ☆29Updated 6 months ago
- Projections of future incidence☆14Updated last year
- Spatial capture-recapture models in Stan☆24Updated 5 years ago
- Bindings for Bayesian TidyModels☆47Updated last week
- Report templates and helper functions for applied epidemiology☆44Updated this week
- ☣☣ Compute and visualise incidence☆57Updated 6 months ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 3 years ago
- An R package to import, clean, and store case data☆25Updated 3 years ago
- Piece-wise exponential Additive Mixed Modeling tools☆51Updated 3 weeks ago
- R package providing utilities for INLA☆31Updated 3 years ago
- The case time series design☆24Updated 5 months ago
- Bayesian Regression with INLA☆52Updated 2 years ago