stewid / SimInf
A framework for data-driven stochastic disease spread simulations
☆35Updated this week
Alternatives and similar repositories for SimInf:
Users that are interested in SimInf are comparing it to the libraries listed below
- R Package for individual based epidemiological models☆30Updated 7 months ago
- A translation of NetLogo functions, dictionary, and framework for R. Intended to be used with a discrete event simulator, like SpaDES☆40Updated 4 months ago
- miscellaneous talks and small projects☆12Updated last week
- R package for easier interactions with the Go.Data API☆13Updated last year
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Repo for the LSHTM R Users Group (RUG)☆9Updated 3 years ago
- Bayesian SEIR model to estimate the effects of social-distancing on COVID-19☆26Updated 3 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- epidemia package☆48Updated 2 years ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated last year
- SEIR+ model☆19Updated 7 months ago
- R tools for monitoring effectiveness of COVID-19 control efforts☆12Updated 4 years ago
- Analysing epidemic trends using AutoML approaches.☆18Updated 3 years ago
- nlrx NetLogo R☆79Updated 7 months ago
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆44Updated 7 months ago
- R package for resampling multilevel models☆37Updated 9 months ago
- A tutorial on interrupted time series regression for the evaluation of public health interventions☆21Updated this week
- R package for "Epidemics: Models and data using R"☆55Updated 2 years ago
- API Client and Data Munging for the Demographic and Health Survey Data☆37Updated last month
- An R package that provides an agent based modeling framework for epidemic models☆28Updated 2 months ago
- The case time series design☆24Updated 3 years ago
- Source code for the EpiEstim app.☆31Updated 4 years ago
- Course on nowcasting and forecasting of infectious disease dynamcis☆16Updated 2 weeks ago
- A practical introduction to modeling in Stan☆46Updated 2 years ago
- ☆41Updated 3 weeks ago
- ☆77Updated 4 years ago
- ☣☣ Compute and visualise incidence☆57Updated 8 months ago
- R package for Bayesian meta-analysis models, using Stan☆49Updated 3 weeks ago
- R package providing utilities for INLA☆29Updated 2 years ago
- Files for a minimal 'reproducible' PhD thesis☆11Updated 4 years ago