stewid / SimInf
A framework for data-driven stochastic disease spread simulations
☆35Updated this week
Alternatives and similar repositories for SimInf:
Users that are interested in SimInf are comparing it to the libraries listed below
- R Package for individual based epidemiological models☆30Updated 8 months ago
- R package for "Epidemics: Models and data using R"☆55Updated 2 years ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- R package for easier interactions with the Go.Data API☆13Updated last year
- miscellaneous talks and small projects☆12Updated last week
- BDM Code examples from Win/OpenBUGS, CARBayes and INLA☆26Updated 5 years ago
- Course on nowcasting and forecasting of infectious disease dynamcis☆16Updated last week
- Analysing epidemic trends using AutoML approaches.☆18Updated 4 years ago
- Repo for the LSHTM R Users Group (RUG)☆9Updated 3 years ago
- ☆41Updated last week
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆44Updated 8 months ago
- Bayesian SEIR model to estimate the effects of social-distancing on COVID-19☆26Updated 3 years ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated last year
- Repository for reproducing results in structured priors MRP paper☆17Updated 4 years ago
- epidemia package☆48Updated 2 years ago
- ☆57Updated 2 months ago
- ☆29Updated last month
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data https://statnet.org☆14Updated 2 weeks ago
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆53Updated 6 months ago
- A translation of NetLogo functions, dictionary, and framework for R. Intended to be used with a discrete event simulator, like SpaDES☆40Updated 5 months ago
- A practical introduction to modeling in Stan☆46Updated 2 years ago
- SEIR+ model☆19Updated 8 months ago
- Bayesian Regression with INLA☆49Updated 2 years ago
- Spatial capture-recapture models in Stan☆22Updated 4 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- An R package with Dynamic Models of infectious diseases☆29Updated 5 months ago
- An R package for interactive visualization of GAM models☆76Updated 3 weeks ago
- R package providing utilities for INLA☆30Updated 2 years ago
- The case time series design☆24Updated 3 years ago