Repository for code of the book "Bioinformatics Algorithms" by Miguel Rocha and Pedro Ferreira. Editor: Elsevier
☆69Sep 17, 2018Updated 8 years ago
Alternatives and similar repositories for BioinformaticsAlgorithmsBook
Users that are interested in BioinformaticsAlgorithmsBook are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Building and analyzing residue interaction networks with cofactors (includes tutorial).☆19Mar 31, 2021Updated 5 years ago
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- Automated Rice Variant calling workflow for HPC, Cloud and Desktop systems.☆13May 11, 2024Updated 2 years ago
- ☆11May 3, 2017Updated 9 years ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- Stand Alone version of ConSurf with detailed tutorial - (installation + database + usage)☆16Feb 5, 2023Updated 3 years ago
- Course in population genomics at BiRC☆12Mar 18, 2026Updated 6 months ago
- Python package for analyzing and visualizing iModulons☆16Aug 31, 2026Updated 2 weeks ago
- The NCBI SARS-CoV-2 Variant Calling (SC2VC) Pipeline allows calling high-confidence variants from SARS-CoV-2 NGS data in a standardized f…☆14Apr 21, 2023Updated 3 years ago
- Materials and tutorials for the 2020 ISB Microbiome Course☆31Nov 10, 2022Updated 3 years ago
- ☆10Apr 10, 2016Updated 10 years ago
- Cognitive Atlas☆18Aug 15, 2016Updated 10 years ago
- Data files for the molecular modelling course☆14Jan 26, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆16May 1, 2025Updated last year
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- A deep model infers gene regulation networks from scRNA-seq data.☆13Sep 3, 2026Updated 2 weeks ago
- Introduction to Ancient Metagenomics Book☆16Sep 10, 2026Updated last week
- ☆10Jan 25, 2019Updated 7 years ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Sep 7, 2026Updated last week
- Solutions to Programming Assignments for Bioinformatics Algorithms (Part 1) on Coursera.org☆30Jan 22, 2014Updated 12 years ago
- A set of tools to analyse the output from TraDIS analyses☆25Jun 15, 2026Updated 3 months ago
- This repository contains the inference, model and tokenizer code for the Molecular Fingerprinting model MFBERT.☆12Nov 8, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Oct 17, 2023Updated 2 years ago
- A suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps…☆15Feb 5, 2026Updated 7 months ago
- Repository for the TRANSIT and TPP tools developed by the Ioerger Lab☆23Dec 23, 2025Updated 8 months ago
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆18Apr 8, 2021Updated 5 years ago
- bioinformatics R test code☆14May 29, 2026Updated 3 months ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.☆13Feb 17, 2025Updated last year
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆24Dec 10, 2025Updated 9 months ago
- Introduction materials for Reproducible Research Curriculum with Jupyter notebook☆11Jan 24, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Interactive plots with chemical structures☆15Nov 14, 2019Updated 6 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…☆110Jan 29, 2026Updated 7 months ago
- Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.☆18Sep 24, 2018Updated 7 years ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆25Aug 9, 2023Updated 3 years ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 7 years ago
- Python code covering some of the algorithms underlying the following fundamental topics in bioinformatics: assembling genomes, comparing …☆14Jun 2, 2014Updated 12 years ago