kloetzl / libmurmurhash

Related projects: ⓘ

• noporpoise / string_buffer
  libstrbuf: A powerful string library for C
  ☆17Updated 7 years ago
• gmarcais / compact_vector
  Bit packed vector of integral values
  ☆25Updated last year
• bingmann / cobs
  COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)
  ☆83Updated 7 months ago
• jlabeit / parallel-divsufsort
  Parallel Lightweight Suffix Array Algorithm.
  ☆17Updated 7 years ago
• Poyias / mBonsai
  Compact Tree Representation
  ☆16Updated 7 years ago
• jermp / sshash
  A compressed, associative, exact, and weighted dictionary for k-mers.
  ☆83Updated 2 weeks ago
• noporpoise / carrays
  Algorithms that work on generic C arrays
  ☆10Updated 7 years ago
• nicolaprezza / BWTIL
  BWT Text Indexing Library: a set of tools to work with BWT-based text indexes
  ☆25Updated 2 years ago
• kdm9 / hail
  Hail: extract lines from a file, a la `head -n x | tail -n y`
  ☆8Updated 4 years ago
• noporpoise / jelly-hash
  Low memory multithreaded hash table
  ☆24Updated 9 years ago
• gmarcais / NoShell
  C++ library to easily start subprocesses and pipelines of commands
  ☆14Updated last year
• rchikhi / benchmphf
  Benchmark of four minimal perfect hash libraries (phf, emphf, CMPH, Sux4J)
  ☆13Updated 7 years ago
• ot / emphf
  An efficient external-memory algorithm for the construction of minimal perfect hash functions
  ☆61Updated 3 months ago
• attractivechaos / udb3
  ☆14Updated 3 months ago
• attractivechaos / dlist
  Five implementations of double linked lists to demonstrate generic data structures in C
  ☆15Updated 4 years ago
• jermp / lphash
  Fast and compact locality-preserving minimal perfect hashing for k-mer sets.
  ☆42Updated 10 months ago
• mklarqvist / positional-popcount
  Fast C functions for the computing the positional popcount (pospopcnt).
  ☆52Updated 4 years ago
• nh13 / pbgzip
  Parallel Block GZIP
  ☆49Updated 8 years ago
• 1ykos / patchmap
  A fast and memory efficient hashmap using sorting to resolve collisions
  ☆43Updated 3 years ago
• ocxtal / rbread
  Header-only, gzread-like reader for gzip, bz2, and xz.
  ☆12Updated 6 years ago
• jermp / essentials
  Essential C++ utilities.
  ☆15Updated 3 months ago
• ekg / mmmulti
  memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort
  ☆27Updated 3 years ago
• dominikkempa / faster-minuter
  Wavelet tree based on a fixed block boosting technique
  ☆14Updated 3 years ago
• mklarqvist / libflagstats
  Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.
  ☆15Updated 4 years ago
• pelotoncycle / bsort
  Extremely fast inplace radix sort
  ☆42Updated 4 years ago
• itomomoti / OnlineRlbwt
  Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.
  ☆14Updated 6 years ago
• attractivechaos / khashl
  Generic hash table library in C
  ☆19Updated 4 months ago
• turpinandrew / shuff
  Static Huffman coding
  ☆10Updated 7 years ago
• attractivechaos / udb2
  For details, see the blog post:
  ☆31Updated 9 months ago
• nicola-gigante / bitvector
  A C++ container-like data structure for storing a vector of bits with fast appending on both sides and fast insertion in the middle, all …
  ☆21Updated 2 years ago