Malva algorithm for indexing and index querying
☆27Oct 16, 2026Updated 3 weeks ago
Alternatives and similar repositories for malva
Users that are interested in malva are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Dataframe-agnostic Zarr Storage powered by Narwhals☆10Dec 1, 2025Updated 11 months ago
- A library for interfacing with SpatialData stores in TS/JS☆11Updated this week
- Links between modalities in mudata☆17Oct 16, 2026Updated 3 weeks ago
- ☆21Oct 15, 2026Updated 3 weeks ago
- A compositional bias testing and pruning tool for multiple sequence alignments☆13Jun 16, 2026Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆19Sep 1, 2023Updated 3 years ago
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆18Aug 24, 2026Updated 2 months ago
- Interface to the Bioformats Java library☆15Feb 17, 2026Updated 8 months ago
- Holoviz Anndata Interface☆14Updated this week
- Bioconductor-friendly bindings for Parquet files.☆11Jun 24, 2025Updated last year
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated last year
- Approximate UniFrac via Weighted MinHash 🦀☆13Oct 31, 2026Updated last week
- Slides and Notebooks for scverse 2024☆16Sep 24, 2024Updated 2 years ago
- Analysis framework for morphological profiling data☆15Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Jaeger is a quick and precise tool for detecting viruses in sequence assemblies.☆11Oct 14, 2026Updated 3 weeks ago
- Illico is a python library performing fast and lightweight CPU-based wilcoxon rank-sum tests for single-cell RNASeq.☆22Updated this week
- fast sketch for DNA or normal sequence data (MinHash WeightedMinHash OrderMinHash and hyperloglog)☆11Updated this week
- Removing empty droplets in multiome datasets☆17Jun 3, 2024Updated 2 years ago
- ☆12Sep 1, 2026Updated 2 months ago
- zod schemas for ome-ngff☆11Nov 7, 2025Updated last year
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆105Nov 24, 2025Updated 11 months ago
- OMERO.web plugin for the Vitessce multimodal data viewer.☆14Jul 29, 2026Updated 3 months ago
- FISK: Fast Iteration of Spaced K-mers☆14Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of…☆16Updated this week
- HuBMAP Data Portal front end☆13Updated this week
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Jan 28, 2020Updated 6 years ago
- Read and write RDS/RDA files in C++☆12Apr 2, 2026Updated 7 months ago
- R tool to analyse and integrate multiple -omics data☆16Sep 10, 2026Updated last month
- ☆11Dec 8, 2022Updated 3 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Jan 6, 2021Updated 5 years ago
- fast, reliable and handy demultiplexing tool for fastx files☆14Jul 9, 2026Updated 3 months ago
- Rust wrapper for STAR aligner☆23Apr 13, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Which tools to choose based on various performance metrics.☆12Nov 20, 2020Updated 5 years ago
- The simplest, fastest software for studying gene regulation in single-cell data. Core SCENIC and SCENIC+ rewritten in Rust, with a Python…☆23Nov 1, 2026Updated last week
- Slice into Zarr arrays in R 🍕☆49Sep 24, 2026Updated last month
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 8 months ago
- Toolbox for single-cell data analysis on sample level☆28Updated this week
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 8 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆24Sep 12, 2025Updated last year