kingaa / pomp
R package for statistical inference using partially observed Markov processes
☆114Updated this week
Alternatives and similar repositories for pomp:
Users that are interested in pomp are comparing it to the libraries listed below
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- loo R package for approximate leave-one-out cross-validation (LOO-CV) and Pareto smoothed importance sampling (PSIS)☆153Updated 2 weeks ago
- General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics☆124Updated last year
- A large set of JAGS examples using R☆97Updated last year
- A complete environment for Bayesian inference within R☆93Updated last year
- 'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)☆65Updated 4 years ago
- Case studies on model assessment, model selection and inference after model selection☆171Updated last year
- The base NIMBLE package for R☆171Updated this week
- R package for statistical inference of spatiotemporal partially observed Markov processes☆11Updated 3 months ago
- Simulation-based Inference for Epidemiological Dynamics☆25Updated 11 months ago
- Projection predictive variable selection☆111Updated last week
- R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)☆11Updated 7 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆126Updated last week
- Implementation of B-Splines in Stan☆51Updated 7 years ago
- Graphical tools for analyzing Markov Chain Monte Carlo simulations from Bayesian inference☆112Updated last year
- An introduction to Bayesian statistics☆73Updated 9 months ago
- Examples of statistical models implemented using JAGS☆100Updated 12 years ago
- The posterior R package☆168Updated 2 weeks ago
- CmdStanR: the R interface to CmdStan☆146Updated this week
- Beginner tutorial for using cmdstan with multithreading☆62Updated 5 years ago
- Bayesian Inference of State Space Models☆43Updated 7 months ago
- Repo for tutorial/paper on mixed-effect GAMs☆122Updated 4 years ago
- ᚩ A DSL for describing and solving differential equations in R☆105Updated 2 months ago
- State space models (dynamic linear models, hidden Markov models) implemented in Stan.☆47Updated 6 years ago
- Draft introduction to probability and inference aimed at the Stan manual.☆86Updated 8 years ago
- R package for "Epidemics: Models and data using R"☆55Updated 2 years ago
- Bayesian linear survival analysis with shrinkage priors in Stan☆24Updated 9 years ago
- SEIR+ model☆19Updated 7 months ago
- ☆54Updated 2 years ago
- An R package for interactive visualization of GAM models☆76Updated last week