cbreto / panelPomp
R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)
☆11Updated 6 months ago
Alternatives and similar repositories for panelPomp:
Users that are interested in panelPomp are comparing it to the libraries listed below
- Simulation-based Inference for Epidemiological Dynamics☆25Updated 11 months ago
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆12Updated 2 years ago
- Data and statistical models for biomarker shedding.☆13Updated this week
- R package for statistical inference using partially observed Markov processes☆114Updated 2 weeks ago
- Tools for automatically generating local sensitivity measures in Stan.☆35Updated 4 years ago
- R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…☆25Updated 6 months ago
- Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.☆48Updated 9 months ago
- Bayesian linear survival analysis with shrinkage priors in Stan☆24Updated 9 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆11Updated 2 years ago
- epidemia package☆48Updated 2 years ago
- Automatic Differentiation for R☆23Updated 6 years ago
- R package for bridge sampling☆32Updated 10 months ago
- R Package for individual based epidemiological models☆30Updated 6 months ago
- Fit stochastic differential equation models with time-varying parameters☆15Updated 10 months ago
- BDM Code examples from Win/OpenBUGS, CARBayes and INLA☆26Updated 5 years ago
- Examples on INLA within MCMC☆11Updated 7 years ago
- Bayesian Inference of Complex Panel Data☆29Updated last week
- An R package for Bayes Linear emulation and history matching.☆16Updated 3 weeks ago
- Rcpp Example for accessing NLopt☆13Updated 3 weeks ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Implementation of B-Splines in Stan☆51Updated 7 years ago
- An R package for integrating differential equations in C++☆18Updated 10 months ago
- Infectious disease model library and utilities☆15Updated 2 years ago
- Towards a more flexible BART☆22Updated this week
- Course on nowcasting and forecasting of infectious disease dynamcis☆16Updated this week
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- Bayesian Inference of State Space Models☆42Updated 6 months ago
- ☆31Updated 3 months ago
- Contemporary statistical inference for infectious disease models using Stan☆15Updated 6 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year