☆19Apr 15, 2025Updated 10 months ago
Alternatives and similar repositories for ARBOL
Users that are interested in ARBOL are comparing it to the libraries listed below
Sorting:
- Reference data for cell-type assignment with clustifyr☆13Nov 3, 2022Updated 3 years ago
- Analysis for BICCN cross-species primary motor cortex project☆23Feb 13, 2024Updated 2 years ago
- ☆25Jan 9, 2024Updated 2 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆29Aug 11, 2022Updated 3 years ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆14Updated this week
- MirMachine, a command line tool to detect microRNA homologs in genome sequences.☆13Dec 3, 2025Updated 3 months ago
- Unbiased single-cell transcriptomic data cell type identification☆14May 7, 2024Updated last year
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆13Mar 23, 2024Updated last year
- Gene group activity utility functions for Scanpy☆100Dec 21, 2024Updated last year
- Snakemake pipeline for the preprocessing, alignment, QC, and quantification of spatial transcriptomics data - both short-read and long-re…☆11Nov 16, 2025Updated 3 months ago
- ☆16Apr 29, 2024Updated last year
- Dataloader for common proteomics search engine outputs into AnnData format☆14Nov 24, 2025Updated 3 months ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated last month
- networktools☆10Aug 4, 2025Updated 7 months ago
- Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data☆11Jan 25, 2026Updated last month
- Simple template for running snakemake with R☆12Jan 31, 2023Updated 3 years ago
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Jul 29, 2023Updated 2 years ago
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆12Mar 7, 2024Updated 2 years ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago
- Map between IETF language tags and OpenType language system tags☆12Aug 20, 2020Updated 5 years ago
- http://tinyurl.com/cruk-shiny☆11Sep 13, 2017Updated 8 years ago
- ☆10Apr 28, 2023Updated 2 years ago
- R and MATLAB scripts for MAGICAL☆11Jun 26, 2024Updated last year
- ☆12May 8, 2025Updated 9 months ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆21Feb 2, 2026Updated last month
- 2022-10-27 R-Ladies St. Louis Presentation☆10Oct 28, 2022Updated 3 years ago
- ☆11May 6, 2021Updated 4 years ago
- Nextflow implementation of scAutoQC pipeline☆11Feb 21, 2026Updated last week
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆12Feb 10, 2026Updated 3 weeks ago
- Reference transcriptome indices build from kallisto for popular organisms☆46Nov 24, 2023Updated 2 years ago
- Finding gene expression states in scRNA-seq data☆50Mar 22, 2024Updated last year
- Short course using RStudio for biological data analysis☆14Jul 7, 2022Updated 3 years ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated last year
- Preprocessing and analysis scripts for the dPCA paper (eLife 2016)☆10Jul 15, 2016Updated 9 years ago
- This project will pull past game data from api-football, and use these statistics to predict the outcome of future premier league matches…☆14Sep 14, 2022Updated 3 years ago
- ☆13Nov 29, 2017Updated 8 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- DataSHIELD server side base functions☆11Feb 23, 2026Updated last week