dalgu90 / icd-coding-benchmarkLinks
Automatic ICD coding benchmark based on the MIMIC dataset
☆37Updated 2 years ago
Alternatives and similar repositories for icd-coding-benchmark
Users that are interested in icd-coding-benchmark are comparing it to the libraries listed below
Sorting:
- My heuristic script for sentence tokenization of mimic notes☆8Updated 7 years ago
- ☆29Updated 3 years ago
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆29Updated last year
- ☆39Updated 2 years ago
- ☆61Updated last year
- A Label Attention Model for ICD Coding from Clinical Text☆70Updated 2 years ago
- auto icd coding with prompt☆49Updated last year
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated last year
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 3 years ago
- ☆98Updated 3 years ago
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆21Updated last month
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆95Updated 10 months ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Updated 5 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding [ACL 2022]☆53Updated 2 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 3 months ago
- ☆22Updated 3 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- Predicting ICD Codes from Clinical Notes☆61Updated 4 years ago
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆13Updated last year
- A python package for removing duplicate text in clinical notes or other documents☆37Updated 4 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- Code for the emrQA question answering dataset☆150Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆78Updated 2 years ago
- Blog post on Medium☆49Updated 2 years ago
- ☆38Updated 3 years ago
- EHR2Vec is a embedding translation tool for medical entities based on attention mechanism. We have provided a version of tensorflow imple…☆13Updated 4 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆15Updated 3 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago