hhcho / secure-gwasLinks
Software for "Secure genome-wide association analysis using multiparty computation", Nature Biotechnology, 2018
☆20Updated 6 years ago
Alternatives and similar repositories for secure-gwas
Users that are interested in secure-gwas are comparing it to the libraries listed below
Sorting:
- ☆19Updated last year
- Readshift: A method to shift high-quality NGS datasets into noisy datasets☆1Updated 6 years ago
- ☆12Updated 2 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10Updated 8 years ago
- Re-encryption by proxy and (additive) homomorphic encryption☆13Updated 6 years ago
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆27Updated last year
- A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow☆18Updated 5 years ago
- A library for compressing, encrypting, and querying alignment data.☆15Updated 9 years ago
- ☆18Updated 3 years ago
- online notebooks for a review of genome sketching☆61Updated 5 years ago
- Haplotype phaser for next-generation sequencing data☆13Updated 3 years ago
- Ressources for Boinformatics Trainings☆9Updated last year
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Updated 5 years ago
- Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny☆20Updated 5 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Updated last year
- GenoTypes Compressor☆16Updated 3 years ago
- ☆11Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆12Updated 4 years ago
- An experimental tool to estimate the similarity between all pairs of contigs☆35Updated 4 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- ☆13Updated 7 years ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆58Updated last year
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆16Updated 7 years ago
- Evaluation of phasing performance☆23Updated 7 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Updated 2 years ago
- ☆37Updated 9 months ago
- Code to reproduce analyses from the sleuth paper☆16Updated 6 years ago
- Copy number estimation and variant calling for duplicated genes using WGS.☆27Updated 3 weeks ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago