hhcho / secure-gwasLinks
Software for "Secure genome-wide association analysis using multiparty computation", Nature Biotechnology, 2018
☆20Updated 7 years ago
Alternatives and similar repositories for secure-gwas
Users that are interested in secure-gwas are comparing it to the libraries listed below
Sorting:
- ☆19Updated last year
- ☆12Updated 3 years ago
- Re-encryption by proxy and (additive) homomorphic encryption☆13Updated 6 years ago
- A library for compressing, encrypting, and querying alignment data.☆15Updated 9 years ago
- A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow☆18Updated 5 years ago
- online notebooks for a review of genome sketching☆61Updated 5 years ago
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10Updated 8 years ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆14Updated last week
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- A secure encryption tool for genomic data☆63Updated last year
- Evaluation of phasing performance☆23Updated 7 years ago
- Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny☆20Updated 5 years ago
- ☆11Updated 2 years ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆36Updated 4 years ago
- Machine learning framework to quantify pathogenicity of structural variants☆12Updated 4 years ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆58Updated last year
- A tool for phasing and imputing haplotypes in 10k+ low coverage sequencing samples☆10Updated 4 years ago
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆27Updated last year
- Analysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility☆19Updated 4 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Updated last year
- ☆12Updated 4 years ago
- Code to reproduce analyses from the sleuth paper☆16Updated 6 years ago
- ☆18Updated 3 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- vcf file manipulation☆22Updated 10 years ago
- Proof-of-concept implementation of GWFA for sequence-to-graph alignment☆57Updated last year
- Scrooge is a high-performance pairwise sequence aligner based on the GenASM algorithm. Scrooge includes three novel algorithmic improveme…☆38Updated 2 years ago
- Accelerated genomics workflows in the Workflow Description Language☆33Updated last year
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆31Updated 7 years ago
- Finding a scalable alternative to the VCF File for genomics analysis☆14Updated 8 years ago