DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions
☆16Jun 18, 2026Updated last month
Alternatives and similar repositories for DynamicGT
Users that are interested in DynamicGT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for generating ensembles with IDPFold2☆21Updated this week
- Bridging Smoothed Molecular Dynamics and Score-Based Learning for Conformational Ensembles☆20May 16, 2026Updated 2 months ago
- FeNNol Pretrained Models Collection☆21Dec 17, 2025Updated 7 months ago
- ☆23Dec 11, 2024Updated last year
- Quantum-mechanical molecular representations☆30Jun 19, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 2 months ago
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆36Feb 1, 2026Updated 5 months ago
- FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook☆19Jun 10, 2023Updated 3 years ago
- PocketMaster is a flexible and automated tool for analyzing, clustering, and visualizing protein binding sites. It allows you to quickly …☆19Feb 22, 2026Updated 4 months ago
- ☆48Updated this week
- A Python tool for automated identification and topological analysis (QTAIM) of Critical Points at the interface between molecular fragmen…☆23Mar 25, 2026Updated 3 months ago
- Biological Relationships - Biorels data preparation infrastructure for biology and drug discovery☆16May 19, 2025Updated last year
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆49Nov 4, 2025Updated 8 months ago
- Protein function prediction using protein structures and deep graph neural networks.☆22Jan 24, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Apr 4, 2025Updated last year
- Drug-Likeness☆16Dec 11, 2022Updated 3 years ago
- ☆19May 21, 2026Updated last month
- A flow matching model for generating conformational ensembles of protein backbones.☆47May 22, 2026Updated last month
- RMSX and Flipbook Package: Time series RMSF combing the features of RMSD and RMSF☆36Updated this week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆60Jan 28, 2026Updated 5 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models☆72Updated this week
- Building a DCA Frustratometer from scratch. Ultimately we aim to compare frustrated sites according to the DCA and AWSEM Frustratometers.☆15Jan 8, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆15Mar 5, 2026Updated 4 months ago
- Convert coarse-grained protein structure to all-atom model☆60Jun 7, 2025Updated last year
- ☆26May 16, 2026Updated 2 months ago
- Long disorder consensus predictor☆24Jul 10, 2026Updated last week
- TPepPro: a deep learning model for predicting peptide-protein interactions☆15Jun 25, 2024Updated 2 years ago
- mcp server for pymol for conversational protein display☆15Jul 12, 2026Updated last week
- UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine lear…☆27Apr 9, 2026Updated 3 months ago
- ParametrizANI - Fast, Accurate and Free Dihedral Parametrization in the Cloud with TorchANI☆22Jul 28, 2025Updated 11 months ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Web application for protein-ligand binding sites analysis and visualization☆20Dec 27, 2025Updated 6 months ago
- ☆50Jun 15, 2026Updated last month
- Disordered protein ensemble prediction☆16Jun 11, 2026Updated last month
- EnsembleFlex - Flexibility Analysis of Structure Ensembles☆19Sep 10, 2025Updated 10 months ago
- A comprehensive resource of binding sites on human surface proteins with binder seeds☆15Feb 26, 2025Updated last year
- A curated, interactive directory of protein design research groups worldwide.☆20Jul 14, 2026Updated last week
- ☆19Apr 13, 2026Updated 3 months ago