AlphaFold 3 inference pipeline.
☆8,250Jun 9, 2026Updated 3 weeks ago
Alternatives and similar repositories for alphafold3
Users that are interested in alphafold3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,974May 6, 2026Updated last month
- Official repository for the Boltz biomolecular interaction models☆4,075May 29, 2026Updated last month
- Implementation of Alphafold 3 from Google Deepmind in Pytorch☆1,674Sep 18, 2025Updated 9 months ago
- ☆2,774Jun 16, 2026Updated 2 weeks ago
- Chai-1, SOTA model for biomolecular structure prediction☆1,956Apr 11, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Open source code for AlphaFold 2.☆14,686Apr 22, 2026Updated 2 months ago
- Code for running RFdiffusion☆2,921Apr 24, 2026Updated 2 months ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,140Feb 7, 2024Updated 2 years ago
- ☆810May 18, 2026Updated last month
- Code for the ProteinMPNN paper☆1,778Aug 14, 2024Updated last year
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆804Updated this week
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,252May 13, 2026Updated last month
- Making Protein folding accessible to all!☆2,800Jun 21, 2026Updated last week
- ☆593Feb 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,387Dec 16, 2025Updated 6 months ago
- User friendly and accurate binder design pipeline☆1,145May 11, 2026Updated last month
- List of papers about Proteins Design using Deep Learning☆1,939Updated this week
- Open source implementation of AlphaFold3☆1,081Oct 7, 2024Updated last year
- Making Protein Design accessible to all via Google Colab!☆918Apr 6, 2026Updated 2 months ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆530Mar 22, 2026Updated 3 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆838Jun 12, 2026Updated 2 weeks ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,532May 2, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A generative model for programmable protein design☆821Apr 11, 2024Updated 2 years ago
- AI-powered ab initio biomolecular dynamics simulation☆576Feb 18, 2025Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆330Oct 6, 2025Updated 8 months ago
- Biological foundation modeling from molecular to genome scale☆1,521Mar 20, 2026Updated 3 months ago
- MMseqs2: ultra fast and sensitive search and clustering suite☆2,090Jun 21, 2026Updated last week
- ColabFold on your local PC☆862Apr 21, 2026Updated 2 months ago
- This package contains deep learning models and related scripts for RoseTTAFold☆2,247Feb 15, 2024Updated 2 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 2 years ago
- Genome modeling and design across all domains of life☆3,962Jun 19, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 10 months ago
- ☆409Aug 7, 2024Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆607Mar 8, 2026Updated 3 months ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆378Jun 3, 2024Updated 2 years ago
- Plausibility checks for generated molecule poses.☆381Mar 7, 2026Updated 3 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆267Jul 24, 2025Updated 11 months ago
- The Rosetta Bio-macromolecule modeling package. Available through license with the University of Washington.☆448Updated this week