argunsah / SpineSLinks
Dendritic Spine Analysis Software
☆13Updated 2 years ago
Alternatives and similar repositories for SpineS
Users that are interested in SpineS are comparing it to the libraries listed below
Sorting:
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Geometry Processing of Conventionally Produced Mouse Brain Slice Images☆7Updated 5 years ago
- 3-D imaging visualisation through slicing☆30Updated 5 months ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated 8 months ago
- ☆8Updated 3 years ago
- CloudReg☆11Updated last year
- ☆22Updated 3 months ago
- The ImageJ framework for quantification of neuronal anatomy☆50Updated last week
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆28Updated 2 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- Brainways☆18Updated last month
- Flow-Registration toolbox for 2P motion compensation☆24Updated 11 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated last year
- ☆34Updated last month
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated this week
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- Live Mouse Tracker analysis☆29Updated 3 weeks ago
- ☆18Updated 3 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Tools for distributed alignment of massive images☆82Updated this week
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- ☆18Updated 3 years ago
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆120Updated 2 weeks ago
- ☆13Updated 4 months ago
- motion correction☆17Updated 2 years ago
- ☆45Updated 5 years ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Automated 3D brain registration with support for multiple species and atlases.☆135Updated 3 weeks ago