GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction
☆32Sep 27, 2021Updated 5 years ago
Alternatives and similar repositories for GraphCDR
Users that are interested in GraphCDR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting cancer drug response using parallel heterogeneous graph convolutional networks with neighborhood interactions☆10Oct 26, 2022Updated 4 years ago
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆105Jun 26, 2023Updated 3 years ago
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Dec 15, 2021Updated 4 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 5 years ago
- A deep generative neural network based approach to impute drug response☆21May 30, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆28May 22, 2020Updated 6 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆21Jun 1, 2023Updated 3 years ago
- Code to replicate "Learning and actioning general principles of cancer cell drug sensitivity"☆13May 16, 2025Updated last year
- The Supplementary data in the paper "A Survey and Systematic Assessment of Computational Methods for Drug Response Prediction"☆12Sep 27, 2019Updated 7 years ago
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- Drug Response Variational Autoencoder☆35Apr 4, 2019Updated 7 years ago
- A visible neural network model for drug response prediction☆154Sep 13, 2023Updated 3 years ago
- Implementation for the paper MoCL: Contrastive Learning on Molecular Graph with multi-level Domain Knowledge☆42Sep 7, 2023Updated 3 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Feb 11, 2026Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Few shot learning for cancer☆37Nov 17, 2021Updated 4 years ago
- [NBME] Interpretable identification of cancer genes across biological networks via transformer-powered graph representation learning☆25Sep 2, 2025Updated last year
- Cancer Drug Response prediction using a Recommender System☆43Jul 6, 2023Updated 3 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆15Nov 30, 2022Updated 3 years ago
- Package to preprocess ontologies and train OntoVAE models.☆16Jan 7, 2025Updated last year
- ☆11May 5, 2025Updated last year
- ☆45May 23, 2025Updated last year
- M2GNN☆13Apr 16, 2023Updated 3 years ago
- ☆12Jun 10, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 爬取哔哩哔哩（bilibili）上各类视频的弹幕数据，进行可视化展示，文本分类☆10Dec 20, 2020Updated 5 years ago
- ☆13Sep 11, 2024Updated 2 years ago
- Code for paper [Disentangled Contrastive Learning for Cross-Domain Recommendation]☆11Mar 21, 2023Updated 3 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Sep 22, 2020Updated 6 years ago
- supplementary tables and files☆11Oct 13, 2023Updated 3 years ago
- ☆19May 15, 2023Updated 3 years ago
- Source code of "NeurIPS21 - Universal Graph Convolutional Networks"☆20Nov 18, 2021Updated 4 years ago
- RefDNN: a reference drug based neural network for more accurate prediction of anticancer drug resistance (Scientific Reports)☆14Apr 21, 2022Updated 4 years ago
- ☆11May 12, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11Jun 14, 2024Updated 2 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Feb 10, 2023Updated 3 years ago
- Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".☆13Dec 27, 2023Updated 2 years ago
- Investigating the role of pre-training dataset size and diversity on the performance of single-cell foundation models☆21May 12, 2026Updated 5 months ago
- iCAGES (integrated CAncer GEnome Score) is an effective tool for prioritizing cancer driver genes for a patient☆14Aug 18, 2022Updated 4 years ago
- A curated list of Heterophilous Graph Self-Supervised Learning papers.☆15Apr 6, 2023Updated 3 years ago
- implementation code for 'PLATE: A Prompt-Enhanced Paradigm for Multi-Scenario Recommendations' in SIGIR 2023☆13Sep 27, 2024Updated 2 years ago