Data and code for COVID-19 NPI effectiveness estimation.
☆30Apr 6, 2021Updated 5 years ago
Alternatives and similar repositories for COVIDNPIs
Users that are interested in COVIDNPIs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 4 years ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 6 years ago
- ☆13Mar 18, 2022Updated 4 years ago
- ☆17Mar 30, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆27Feb 25, 2021Updated 5 years ago
- epidemicforcasting.org visualization repository☆20Jan 24, 2023Updated 3 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆17Feb 13, 2025Updated last year
- Analysis code and data for COVID-19 age-specific clinical fraction☆24May 21, 2020Updated 6 years ago
- Simulate the spread of COVID-19 with different policies☆18Jul 20, 2026Updated last month
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated 6 months ago
- Supplemental information and data for the manuscript 'Sparking "The BBC Four Pandemic": Leveraging citizen science and mobile phones to m…☆10May 11, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 4 years ago
- python app for doing personalized causal medicine using the methods invented by Judea Pearl et al.☆25Feb 13, 2023Updated 3 years ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 5 years ago
- Simulators for Compartmental Models in Epidemiology☆41Jun 25, 2020Updated 6 years ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆12Sep 10, 2024Updated last year
- Excess deaths due to COVID-19 pandemic in 2020☆11Jan 27, 2022Updated 4 years ago
- This is the code and configuration for our paper, OpenSAFELY: factors associated with COVID-19-related hospital death in the linked elect…☆33Jun 6, 2024Updated 2 years ago
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆10Jul 11, 2025Updated last year
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 10 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Microscopic Markov Chain Approach to model the spreading of COVID-19☆19Apr 26, 2021Updated 5 years ago
- Population-wide Testing, Tracing and Isolation Models☆15Jan 14, 2021Updated 5 years ago
- Updates to the synthetic contact matrices☆41Sep 27, 2023Updated 2 years ago
- ☆26Jul 28, 2026Updated last month
- Toolbox for non-linear calibration modeling.☆32Jul 21, 2026Updated last month
- A framework for data-driven stochastic disease spread simulations☆39Aug 23, 2026Updated last week
- Simmel is a wearable platform that enables COVID-19 contact tracing while preserving user privacy.☆21Aug 18, 2020Updated 6 years ago
- Flexible Markov chain monte carlo via reparameterization☆13Jul 18, 2024Updated 2 years ago
- ☆19Dec 22, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Storage for results of Bayesian inference☆15Updated this week
- The data provide past data for the daily updates published by the Scottish Government☆11Apr 13, 2022Updated 4 years ago
- Monte-Carlo State Space Models☆19Jul 1, 2024Updated 2 years ago
- Grouped dates in R☆21Mar 25, 2026Updated 5 months ago
- Pareto smoothed importance sampling☆18Updated this week
- This project holds a line-list data (including mobility and exposure history, as well as epidemiological Timelines) of 10,000+ COVID-19 c…☆14Apr 28, 2023Updated 3 years ago
- A human mobility flow-augmented stochastic SEIR-style epidemic modeling framework is developed, which combines with data assimilation and…☆15Mar 10, 2023Updated 3 years ago