Data and code for COVID-19 NPI effectiveness estimation.
☆31Apr 6, 2021Updated 4 years ago
Alternatives and similar repositories for COVIDNPIs
Users that are interested in COVIDNPIs are comparing it to the libraries listed below
Sorting:
- ☆16Aug 18, 2021Updated 4 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17May 9, 2024Updated last year
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 4 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 3 years ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Jan 27, 2022Updated 4 years ago
- A Bayesian model for time-series count data with weekend effects and a lagged reporting process☆10Mar 7, 2022Updated 3 years ago
- ☆13Mar 18, 2022Updated 3 years ago
- ☆27Feb 25, 2021Updated 5 years ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 3 years ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Sep 10, 2024Updated last year
- Population-wide Testing, Tracing and Isolation Models☆15Jan 14, 2021Updated 5 years ago
- Analysis code and data for COVID-19 age-specific clinical fraction☆24May 21, 2020Updated 5 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Grouped dates in R☆20Updated this week
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 4 months ago
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 3 months ago
- Given a global mean temperature pathway, generate random global climate fields consistent with it and with spatial and temporal correlati…☆14Oct 8, 2020Updated 5 years ago
- Supporting materials for Nishiura et al "Serial interval of novel coronavirus (COVID-19) infections" International journal of infectious …☆14Jun 2, 2020Updated 5 years ago
- Updates to the synthetic contact matrices☆39Sep 27, 2023Updated 2 years ago
- Tools for generalized quantile modeling☆15Sep 28, 2022Updated 3 years ago
- EnKF_seir☆23Aug 12, 2021Updated 4 years ago
- ☆19Dec 22, 2025Updated 2 months ago
- Infectious disease model library and utilities☆15Sep 2, 2022Updated 3 years ago
- Storage for results of Bayesian inference☆15Updated this week
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆17Feb 13, 2025Updated last year
- Create Contact Matrices from Population Data