An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena
☆18Apr 6, 2026Updated 3 weeks ago
Alternatives and similar repositories for ecell4
Users that are interested in ecell4 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GTS: Genome Transformation Subprograms☆15Feb 25, 2023Updated 3 years ago
- general purpose coarse-grained molecular dynamics simulation package☆35Jan 27, 2023Updated 3 years ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 4 years ago
- 3D geoms for plotnine (grammar of graphics in Python)☆13Aug 5, 2022Updated 3 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Rust bindings to chemfiles☆17Mar 9, 2026Updated last month
- CBMPy is a Python based platform for constraint based modelling and analysis.☆20Updated this week
- ☆13Oct 7, 2016Updated 9 years ago
- JupyterLab renderer of dagitty causal diagrams☆24Oct 6, 2023Updated 2 years ago
- INTERSTELLAR: Interpretation, scalable transformation, and emulation of large-scale sequencing reads☆17May 22, 2024Updated last year
- logic programming in elixir☆10Nov 1, 2018Updated 7 years ago
- A ROS nodelet to reproject image as if viewing from different viewpoint☆12Oct 4, 2021Updated 4 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- Segmentation models in Julia☆15Feb 15, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A parser combinator for ruby, pulled out of cvs (!!) into git for everyone's parsing pleasure☆30Aug 12, 2019Updated 6 years ago
- Data Structure and Algorithm with C (2021 Spring)☆11Jan 22, 2026Updated 3 months ago
- ☆12Jul 6, 2022Updated 3 years ago
- This repo is NO LONGER IN USE. Please see Opentrons/opentrons instead.☆15Oct 4, 2017Updated 8 years ago
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Sep 6, 2022Updated 3 years ago
- Example of how to use R in Jupyter notebooks and make compatible with Binder☆17Feb 25, 2019Updated 7 years ago
- ☆13Dec 5, 2022Updated 3 years ago
- An experimental formalization of Knot Theory in Agda, with specific attention paid to Legendrian Knot Theory☆15Oct 15, 2018Updated 7 years ago
- Forth package manager for theForthNet☆14Apr 4, 2018Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Verify conda recipes and packages☆22Aug 26, 2025Updated 8 months ago
- ☆10Nov 14, 2018Updated 7 years ago
- Digital Ocean Tutorials 上一些文章的翻译,主要为运维相关。https://www.digitalocean.com/community/tutorials☆12Jun 6, 2016Updated 9 years ago
- A javascript based control software for igus REBEL motors☆13Jul 14, 2023Updated 2 years ago
- Yet another Scheme interpreter.☆11Sep 17, 2022Updated 3 years ago
- Velo is a tiny language (STLC + Hutton's Razor with Bools) to showcase & explore efficient verified implementations in Idris2.☆16Apr 3, 2023Updated 3 years ago
- A generic library for linear and non-linear Gaussian smoothing problems. The code leverages JAX and implements several linearization algo…☆13Apr 20, 2026Updated last week
- ☆13Nov 15, 2023Updated 2 years ago
- AstraZeneca add-ons to Orange.☆23Jun 15, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- tak is a benchmark thing 👍 (or maybe just an excuse to collect all the languages)☆14Oct 24, 2025Updated 6 months ago
- Add CRIU support to docker-for-mac.☆17Jan 28, 2018Updated 8 years ago
- On the fly conversion of Python docstrings to markdown☆31Jun 20, 2025Updated 10 months ago
- ☆10Nov 30, 2023Updated 2 years ago
- Tectonic typesetting for Julia.☆32Jan 5, 2026Updated 3 months ago
- General Utilities☆55Apr 18, 2026Updated 2 weeks ago
- AlphaFlow Reinforcement Learning☆10Apr 13, 2023Updated 3 years ago